Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
APOA1P02647 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
APOA1P02647 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
APOA1P02647 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14.31□□□□□ -0.12
APOA1P02647 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.31□□□□□ -0.12
APOA1P02647 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
APOA1P02647 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 AC006504.5-208ENST00000588784 2401 ntBASIC14.31□□□□□ -0.12
APOA1P02647 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.31□□□□□ -0.12
APOA1P02647 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.31□□□□□ -0.12
APOA1P02647 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.31□□□□□ -0.12
APOA1P02647 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.31□□□□□ -0.12
APOA1P02647 AC011840.4-201ENST00000578471 627 ntBASIC14.31□□□□□ -0.12
APOA1P02647 AC010654.1-201ENST00000615722 808 ntBASIC14.31□□□□□ -0.12
APOA1P02647 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.31□□□□□ -0.12
APOA1P02647 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
APOA1P02647 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.31□□□□□ -0.12
APOA1P02647 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
APOA1P02647 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.31□□□□□ -0.12
APOA1P02647 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.31□□□□□ -0.12
APOA1P02647 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.31□□□□□ -0.12
APOA1P02647 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
APOA1P02647 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.31□□□□□ -0.12
APOA1P02647 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.3□□□□□ -0.12
APOA1P02647 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.3□□□□□ -0.12
APOA1P02647 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
APOA1P02647 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
APOA1P02647 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
APOA1P02647 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
APOA1P02647 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.3□□□□□ -0.12
APOA1P02647 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
APOA1P02647 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOA1P02647 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.3□□□□□ -0.12
APOA1P02647 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.3□□□□□ -0.12
APOA1P02647 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
APOA1P02647 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA1P02647 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.3□□□□□ -0.12
APOA1P02647 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC14.3□□□□□ -0.12
APOA1P02647 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOA1P02647 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOA1P02647 AL845331.1-201ENST00000424978 1190 ntBASIC14.3□□□□□ -0.12
APOA1P02647 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.3□□□□□ -0.12
APOA1P02647 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.3□□□□□ -0.12
APOA1P02647 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.3□□□□□ -0.12
APOA1P02647 AC011467.2-201ENST00000598425 242 ntBASIC14.3□□□□□ -0.12
APOA1P02647 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.3□□□□□ -0.12
APOA1P02647 AL592071.1-201ENST00000611956 408 ntBASIC14.3□□□□□ -0.12
APOA1P02647 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
APOA1P02647 AL590326.2-201ENST00000625139 305 ntBASIC14.3□□□□□ -0.12
APOA1P02647 PGM5P2-202ENST00000637225 1043 ntBASIC14.3□□□□□ -0.12
APOA1P02647 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.3□□□□□ -0.12
APOA1P02647 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA1P02647 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOA1P02647 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
APOA1P02647 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.3□□□□□ -0.12
APOA1P02647 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOA1P02647 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
APOA1P02647 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA1P02647 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOA1P02647 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA1P02647 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.3□□□□□ -0.12
APOA1P02647 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.3□□□□□ -0.12
APOA1P02647 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.3□□□□□ -0.12
APOA1P02647 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
APOA1P02647 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
APOA1P02647 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.3□□□□□ -0.12
APOA1P02647 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC14.3□□□□□ -0.12
APOA1P02647 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOA1P02647 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
APOA1P02647 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOA1P02647 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
APOA1P02647 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.29□□□□□ -0.12
APOA1P02647 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms