Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 C1QBPP1-201ENST00000400117 770 ntBASIC17.51■□□□□ 0.39
CD4P01730 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 GPAA1P2-201ENST00000417923 928 ntBASIC17.51■□□□□ 0.39
CD4P01730 AC026954.1-201ENST00000429771 1293 ntBASIC17.51■□□□□ 0.39
CD4P01730 AC016694.1-201ENST00000434179 700 ntBASIC17.51■□□□□ 0.39
CD4P01730 GOLGA2P4-201ENST00000441462 777 ntBASIC17.51■□□□□ 0.39
CD4P01730 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.51■□□□□ 0.39
CD4P01730 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC17.51■□□□□ 0.39
CD4P01730 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
CD4P01730 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 AC079316.1-201ENST00000548397 411 ntBASIC17.51■□□□□ 0.39
CD4P01730 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.51■□□□□ 0.39
CD4P01730 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC17.51■□□□□ 0.39
CD4P01730 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CD4P01730 AL049840.4-201ENST00000602422 811 ntBASIC17.51■□□□□ 0.39
CD4P01730 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC17.51■□□□□ 0.39
CD4P01730 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
CD4P01730 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.51■□□□□ 0.39
CD4P01730 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
CD4P01730 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD4P01730 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC17.51■□□□□ 0.39
CD4P01730 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.5■□□□□ 0.39
CD4P01730 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CD4P01730 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 BNIP3P1-202ENST00000550043 1585 ntBASIC17.5■□□□□ 0.39
CD4P01730 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC17.5■□□□□ 0.39
CD4P01730 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CD4P01730 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 YBX1P6-201ENST00000442962 1002 ntBASIC17.5■□□□□ 0.39
CD4P01730 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.5■□□□□ 0.39
CD4P01730 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.5■□□□□ 0.39
CD4P01730 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 DUX4L45-201ENST00000566406 1057 ntBASIC17.5■□□□□ 0.39
CD4P01730 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.5■□□□□ 0.39
CD4P01730 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 AC010328.2-201ENST00000597698 1111 ntBASIC17.5■□□□□ 0.39
CD4P01730 AC244669.2-201ENST00000612320 853 ntBASIC17.5■□□□□ 0.39
CD4P01730 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.5■□□□□ 0.39
CD4P01730 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.5■□□□□ 0.39
CD4P01730 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.5■□□□□ 0.39
CD4P01730 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.5■□□□□ 0.39
CD4P01730 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.5■□□□□ 0.39
CD4P01730 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.5■□□□□ 0.39
CD4P01730 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD4P01730 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD4P01730 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD4P01730 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD4P01730 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.49■□□□□ 0.39
CD4P01730 AC134312.5-201ENST00000568031 1313 ntBASIC17.49■□□□□ 0.39
CD4P01730 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CD4P01730 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.49■□□□□ 0.39
CD4P01730 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.49■□□□□ 0.39
CD4P01730 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CD4P01730 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CD4P01730 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC17.49■□□□□ 0.39
CD4P01730 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD4P01730 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD4P01730 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CD4P01730 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.49■□□□□ 0.39
CD4P01730 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD4P01730 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CD4P01730 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.49■□□□□ 0.39
CD4P01730 AC093433.1-201ENST00000458048 571 ntBASIC17.49■□□□□ 0.39
CD4P01730 RPL13AP20-201ENST00000459725 609 ntBASIC17.49■□□□□ 0.39
CD4P01730 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.49■□□□□ 0.39
CD4P01730 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.49■□□□□ 0.39
CD4P01730 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.49■□□□□ 0.39
CD4P01730 AP001063.1-201ENST00000568332 529 ntBASIC17.49■□□□□ 0.39
CD4P01730 AC005252.2-201ENST00000624630 1141 ntBASIC17.49■□□□□ 0.39
CD4P01730 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms