Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP1P01033 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP1P01033 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP1P01033 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP1P01033 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP1P01033 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP1P01033 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP1P01033 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TIMP1P01033 MIR33B-201ENST00000385104 96 ntBASIC16.98■□□□□ 0.31
TIMP1P01033 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
TIMP1P01033 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.98■□□□□ 0.31
TIMP1P01033 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP1P01033 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP1P01033 SPTLC1P5-201ENST00000450718 252 ntBASIC16.98■□□□□ 0.31
TIMP1P01033 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.98■□□□□ 0.31
TIMP1P01033 SERPINA13P-202ENST00000478994 924 ntBASIC16.98■□□□□ 0.31
TIMP1P01033 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP1P01033 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.98■□□□□ 0.31
TIMP1P01033 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.98■□□□□ 0.31
TIMP1P01033 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.98■□□□□ 0.31
TIMP1P01033 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.98■□□□□ 0.31
TIMP1P01033 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
TIMP1P01033 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP1P01033 RNF216P1-203ENST00000404404 2427 ntBASIC16.98■□□□□ 0.31
TIMP1P01033 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.98■□□□□ 0.31
TIMP1P01033 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP1P01033 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP1P01033 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.98■□□□□ 0.31
TIMP1P01033 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TIMP1P01033 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.98■□□□□ 0.31
TIMP1P01033 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP1P01033 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP1P01033 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP1P01033 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TIMP1P01033 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.97■□□□□ 0.31
TIMP1P01033 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.97■□□□□ 0.31
TIMP1P01033 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TIMP1P01033 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.97■□□□□ 0.31
TIMP1P01033 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP1P01033 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP1P01033 SDCCAG3P2-201ENST00000326105 1023 ntBASIC16.97■□□□□ 0.31
TIMP1P01033 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TIMP1P01033 RNU1-114P-201ENST00000365297 166 ntBASIC16.97■□□□□ 0.31
TIMP1P01033 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP1P01033 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.97■□□□□ 0.31
TIMP1P01033 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TIMP1P01033 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.97■□□□□ 0.31
TIMP1P01033 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TIMP1P01033 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.97■□□□□ 0.31
TIMP1P01033 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.97■□□□□ 0.31
TIMP1P01033 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.97■□□□□ 0.31
TIMP1P01033 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.97■□□□□ 0.31
TIMP1P01033 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
TIMP1P01033 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC16.97■□□□□ 0.31
TIMP1P01033 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP1P01033 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP1P01033 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
TIMP1P01033 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP1P01033 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP1P01033 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TIMP1P01033 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TIMP1P01033 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TIMP1P01033 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP1P01033 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP1P01033 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.96■□□□□ 0.31
TIMP1P01033 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.96■□□□□ 0.31
TIMP1P01033 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP1P01033 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TIMP1P01033 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.96■□□□□ 0.31
TIMP1P01033 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TIMP1P01033 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.96■□□□□ 0.31
TIMP1P01033 AL008707.1-201ENST00000422498 534 ntBASIC16.96■□□□□ 0.31
TIMP1P01033 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.96■□□□□ 0.31
TIMP1P01033 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP1P01033 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP1P01033 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.96■□□□□ 0.31
TIMP1P01033 FTLP1-201ENST00000449155 526 ntBASIC16.96■□□□□ 0.31
TIMP1P01033 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP1P01033 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.96■□□□□ 0.31
TIMP1P01033 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.96■□□□□ 0.31
TIMP1P01033 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC16.96■□□□□ 0.31
TIMP1P01033 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
TIMP1P01033 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.96■□□□□ 0.31
TIMP1P01033 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TIMP1P01033 MIR7845-201ENST00000618396 99 ntBASIC16.96■□□□□ 0.31
TIMP1P01033 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP1P01033 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.96■□□□□ 0.31
TIMP1P01033 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP1P01033 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP1P01033 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TIMP1P01033 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TIMP1P01033 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.96■□□□□ 0.3
TIMP1P01033 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TIMP1P01033 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TIMP1P01033 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TIMP1P01033 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.95■□□□□ 0.3
TIMP1P01033 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TIMP1P01033 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TIMP1P01033 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms