Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.38■□□□□ 0.21
MT-CO1P00395 AL512361.1-201ENST00000554200 418 ntBASIC16.38■□□□□ 0.21
MT-CO1P00395 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.38■□□□□ 0.21
MT-CO1P00395 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.38■□□□□ 0.21
MT-CO1P00395 RN7SL204P-201ENST00000582831 262 ntBASIC16.38■□□□□ 0.21
MT-CO1P00395 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
MT-CO1P00395 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
MT-CO1P00395 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.38■□□□□ 0.21
MT-CO1P00395 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.38■□□□□ 0.21
MT-CO1P00395 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
MT-CO1P00395 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
MT-CO1P00395 AC022144.1-201ENST00000602255 1580 ntBASIC16.38■□□□□ 0.21
MT-CO1P00395 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.38■□□□□ 0.21
MT-CO1P00395 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MT-CO1P00395 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-CO1P00395 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-CO1P00395 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-CO1P00395 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
MT-CO1P00395 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.37■□□□□ 0.21
MT-CO1P00395 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-CO1P00395 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-CO1P00395 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.37■□□□□ 0.21
MT-CO1P00395 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.37■□□□□ 0.21
MT-CO1P00395 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
MT-CO1P00395 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.37■□□□□ 0.21
MT-CO1P00395 AC236430.1-201ENST00000402231 743 ntBASIC16.37■□□□□ 0.21
MT-CO1P00395 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-CO1P00395 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.37■□□□□ 0.21
MT-CO1P00395 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.37■□□□□ 0.21
MT-CO1P00395 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.37■□□□□ 0.21
MT-CO1P00395 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MT-CO1P00395 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.37■□□□□ 0.21
MT-CO1P00395 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-CO1P00395 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.37■□□□□ 0.21
MT-CO1P00395 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.37■□□□□ 0.21
MT-CO1P00395 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.37■□□□□ 0.21
MT-CO1P00395 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.37■□□□□ 0.21
MT-CO1P00395 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC16.37■□□□□ 0.21
MT-CO1P00395 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.37■□□□□ 0.21
MT-CO1P00395 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MT-CO1P00395 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-CO1P00395 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-CO1P00395 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
MT-CO1P00395 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.37■□□□□ 0.21
MT-CO1P00395 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-CO1P00395 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.37■□□□□ 0.21
MT-CO1P00395 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-CO1P00395 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MT-CO1P00395 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-CO1P00395 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
MT-CO1P00395 AL596087.1-201ENST00000400979 1969 ntBASIC16.37■□□□□ 0.21
MT-CO1P00395 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MT-CO1P00395 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-CO1P00395 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.36■□□□□ 0.21
MT-CO1P00395 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-CO1P00395 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-CO1P00395 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-CO1P00395 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
MT-CO1P00395 AP002414.2-201ENST00000591780 3365 ntBASIC16.36■□□□□ 0.21
MT-CO1P00395 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
MT-CO1P00395 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-CO1P00395 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.36■□□□□ 0.21
MT-CO1P00395 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MT-CO1P00395 AC002472.2-201ENST00000442739 958 ntBASIC16.36■□□□□ 0.21
MT-CO1P00395 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-CO1P00395 AC245100.5-201ENST00000452108 331 ntBASIC16.36■□□□□ 0.21
MT-CO1P00395 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MT-CO1P00395 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.36■□□□□ 0.21
MT-CO1P00395 AC010336.2-201ENST00000564226 506 ntBASIC16.36■□□□□ 0.21
MT-CO1P00395 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
MT-CO1P00395 AC008738.7-201ENST00000609744 511 ntBASIC16.36■□□□□ 0.21
MT-CO1P00395 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-CO1P00395 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MT-CO1P00395 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-CO1P00395 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-CO1P00395 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MT-CO1P00395 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.36■□□□□ 0.21
MT-CO1P00395 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MT-CO1P00395 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.36■□□□□ 0.21
MT-CO1P00395 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MT-CO1P00395 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms