Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
ALDH1A1P00352 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ALDH1A1P00352 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ALDH1A1P00352 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
ALDH1A1P00352 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ALDH1A1P00352 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ALDH1A1P00352 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ALDH1A1P00352 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ALDH1A1P00352 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
ALDH1A1P00352 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ALDH1A1P00352 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.93■□□□□ 0.46
ALDH1A1P00352 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
ALDH1A1P00352 KLF2P2-201ENST00000416807 1039 ntBASIC17.93■□□□□ 0.46
ALDH1A1P00352 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.93■□□□□ 0.46
ALDH1A1P00352 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.93■□□□□ 0.46
ALDH1A1P00352 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ALDH1A1P00352 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
ALDH1A1P00352 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.93■□□□□ 0.46
ALDH1A1P00352 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC17.93■□□□□ 0.46
ALDH1A1P00352 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ALDH1A1P00352 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ALDH1A1P00352 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ALDH1A1P00352 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC17.93■□□□□ 0.46
ALDH1A1P00352 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.93■□□□□ 0.46
ALDH1A1P00352 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.93■□□□□ 0.46
ALDH1A1P00352 AC006480.2-201ENST00000609770 1337 ntBASIC17.93■□□□□ 0.46
ALDH1A1P00352 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
ALDH1A1P00352 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
ALDH1A1P00352 AL390961.4-201ENST00000623958 2535 ntBASIC17.93■□□□□ 0.46
ALDH1A1P00352 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.93■□□□□ 0.46
ALDH1A1P00352 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.93■□□□□ 0.46
ALDH1A1P00352 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 AC007274.2-201ENST00000421675 662 ntBASIC17.92■□□□□ 0.46
ALDH1A1P00352 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 AC011742.3-201ENST00000439053 820 ntBASIC17.92■□□□□ 0.46
ALDH1A1P00352 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 AC005740.2-201ENST00000511085 419 ntBASIC17.92■□□□□ 0.46
ALDH1A1P00352 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.92■□□□□ 0.46
ALDH1A1P00352 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
ALDH1A1P00352 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALDH1A1P00352 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALDH1A1P00352 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
ALDH1A1P00352 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALDH1A1P00352 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 CRCP-204ENST00000398684 492 ntTSL 2 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
ALDH1A1P00352 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 AL596276.2-201ENST00000447525 331 ntBASIC17.91■□□□□ 0.46
ALDH1A1P00352 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 AC024681.1-201ENST00000521917 487 ntBASIC17.91■□□□□ 0.46
ALDH1A1P00352 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
ALDH1A1P00352 AP003419.4-201ENST00000616071 517 ntBASIC17.91■□□□□ 0.46
ALDH1A1P00352 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms