Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.13■□□□□ 0.33
CSPG5O95196 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.13■□□□□ 0.33
CSPG5O95196 AC068587.10-201ENST00000641210 219 ntBASIC17.13■□□□□ 0.33
CSPG5O95196 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
CSPG5O95196 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.13■□□□□ 0.33
CSPG5O95196 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CSPG5O95196 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
CSPG5O95196 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CSPG5O95196 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CSPG5O95196 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CSPG5O95196 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC17.13■□□□□ 0.33
CSPG5O95196 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.13■□□□□ 0.33
CSPG5O95196 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.13■□□□□ 0.33
CSPG5O95196 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CSPG5O95196 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CSPG5O95196 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.12■□□□□ 0.33
CSPG5O95196 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CSPG5O95196 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.12■□□□□ 0.33
CSPG5O95196 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.12■□□□□ 0.33
CSPG5O95196 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CSPG5O95196 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.12■□□□□ 0.33
CSPG5O95196 PCGF3-213ENST00000620529 1899 ntBASIC17.12■□□□□ 0.33
CSPG5O95196 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.12■□□□□ 0.33
CSPG5O95196 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 MIR1908-201ENST00000410394 80 ntBASIC17.12■□□□□ 0.33
CSPG5O95196 AC099336.1-201ENST00000417053 1171 ntBASIC17.12■□□□□ 0.33
CSPG5O95196 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CSPG5O95196 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.12■□□□□ 0.33
CSPG5O95196 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.12■□□□□ 0.33
CSPG5O95196 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.12■□□□□ 0.33
CSPG5O95196 RARRES2P5-201ENST00000564013 466 ntBASIC17.12■□□□□ 0.33
CSPG5O95196 AC092337.1-201ENST00000568699 1129 ntBASIC17.12■□□□□ 0.33
CSPG5O95196 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CSPG5O95196 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.12■□□□□ 0.33
CSPG5O95196 AC233724.13-201ENST00000598383 410 ntBASIC17.12■□□□□ 0.33
CSPG5O95196 MIR6787-201ENST00000616675 61 ntBASIC17.12■□□□□ 0.33
CSPG5O95196 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.12■□□□□ 0.33
CSPG5O95196 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
CSPG5O95196 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.12■□□□□ 0.33
CSPG5O95196 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.12■□□□□ 0.33
CSPG5O95196 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC17.12■□□□□ 0.33
CSPG5O95196 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CSPG5O95196 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CSPG5O95196 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CSPG5O95196 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.11■□□□□ 0.33
CSPG5O95196 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.11■□□□□ 0.33
CSPG5O95196 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
CSPG5O95196 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CSPG5O95196 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.11■□□□□ 0.33
CSPG5O95196 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CSPG5O95196 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 AC005229.1-201ENST00000392885 409 ntBASIC17.11■□□□□ 0.33
CSPG5O95196 BOLA2P3-201ENST00000404566 256 ntBASIC17.11■□□□□ 0.33
CSPG5O95196 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.11■□□□□ 0.33
CSPG5O95196 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CSPG5O95196 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.11■□□□□ 0.33
CSPG5O95196 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CSPG5O95196 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.11■□□□□ 0.33
CSPG5O95196 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.11■□□□□ 0.33
CSPG5O95196 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CSPG5O95196 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.11■□□□□ 0.33
CSPG5O95196 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC17.11■□□□□ 0.33
CSPG5O95196 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.11■□□□□ 0.33
CSPG5O95196 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms