Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC18.53■□□□□ 0.56
CTNND1O60716 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTNND1O60716 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.53■□□□□ 0.56
CTNND1O60716 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.53■□□□□ 0.56
CTNND1O60716 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.53■□□□□ 0.56
CTNND1O60716 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CTNND1O60716 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTNND1O60716 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTNND1O60716 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC18.53■□□□□ 0.56
CTNND1O60716 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.53■□□□□ 0.56
CTNND1O60716 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CTNND1O60716 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC18.53■□□□□ 0.56
CTNND1O60716 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CTNND1O60716 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTNND1O60716 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTNND1O60716 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTNND1O60716 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CTNND1O60716 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
CTNND1O60716 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CTNND1O60716 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTNND1O60716 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.53■□□□□ 0.56
CTNND1O60716 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CTNND1O60716 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTNND1O60716 AC018695.7-201ENST00000624587 2492 ntBASIC18.52■□□□□ 0.56
CTNND1O60716 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTNND1O60716 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.52■□□□□ 0.56
CTNND1O60716 TUBB1P2-201ENST00000422712 1306 ntBASIC18.52■□□□□ 0.56
CTNND1O60716 TUBB1P1-201ENST00000503144 1300 ntBASIC18.52■□□□□ 0.56
CTNND1O60716 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTNND1O60716 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CTNND1O60716 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC18.52■□□□□ 0.56
CTNND1O60716 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTNND1O60716 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTNND1O60716 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTNND1O60716 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTNND1O60716 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTNND1O60716 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.52■□□□□ 0.56
CTNND1O60716 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CTNND1O60716 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTNND1O60716 AC007551.1-201ENST00000457394 519 ntBASIC18.52■□□□□ 0.56
CTNND1O60716 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.52■□□□□ 0.56
CTNND1O60716 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18.52■□□□□ 0.56
CTNND1O60716 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.52■□□□□ 0.56
CTNND1O60716 FAM8A2P-201ENST00000528813 1142 ntBASIC18.52■□□□□ 0.56
CTNND1O60716 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC18.52■□□□□ 0.56
CTNND1O60716 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CTNND1O60716 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18.52■□□□□ 0.56
CTNND1O60716 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTNND1O60716 AP001063.1-201ENST00000568332 529 ntBASIC18.52■□□□□ 0.56
CTNND1O60716 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
CTNND1O60716 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC18.52■□□□□ 0.56
CTNND1O60716 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTNND1O60716 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTNND1O60716 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CTNND1O60716 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CTNND1O60716 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTNND1O60716 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTNND1O60716 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CTNND1O60716 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CTNND1O60716 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.52■□□□□ 0.55
CTNND1O60716 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTNND1O60716 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.51■□□□□ 0.55
CTNND1O60716 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.51■□□□□ 0.55
CTNND1O60716 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTNND1O60716 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.51■□□□□ 0.55
CTNND1O60716 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC18.51■□□□□ 0.55
CTNND1O60716 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTNND1O60716 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.51■□□□□ 0.55
CTNND1O60716 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTNND1O60716 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTNND1O60716 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CTNND1O60716 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CTNND1O60716 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CTNND1O60716 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.51■□□□□ 0.55
CTNND1O60716 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.51■□□□□ 0.55
CTNND1O60716 AC012441.1-201ENST00000446669 685 ntBASIC18.51■□□□□ 0.55
CTNND1O60716 AC093433.1-201ENST00000458048 571 ntBASIC18.51■□□□□ 0.55
CTNND1O60716 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTNND1O60716 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC18.51■□□□□ 0.55
CTNND1O60716 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.51■□□□□ 0.55
CTNND1O60716 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.51■□□□□ 0.55
CTNND1O60716 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTNND1O60716 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.51■□□□□ 0.55
CTNND1O60716 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.51■□□□□ 0.55
CTNND1O60716 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTNND1O60716 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTNND1O60716 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTNND1O60716 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTNND1O60716 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTNND1O60716 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTNND1O60716 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CTNND1O60716 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTNND1O60716 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTNND1O60716 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTNND1O60716 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTNND1O60716 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.51■□□□□ 0.55
CTNND1O60716 AL607033.1-201ENST00000623900 1599 ntBASIC18.51■□□□□ 0.55
CTNND1O60716 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTNND1O60716 AC134312.5-201ENST00000568031 1313 ntBASIC18.5■□□□□ 0.55
CTNND1O60716 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms