Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.27□□□□□ -0.13
CXCL13O43927 AC135586.1-201ENST00000539323 574 ntBASIC14.27□□□□□ -0.13
CXCL13O43927 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.27□□□□□ -0.13
CXCL13O43927 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.27□□□□□ -0.13
CXCL13O43927 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CXCL13O43927 AC025048.3-201ENST00000590609 569 ntBASIC14.27□□□□□ -0.13
CXCL13O43927 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
CXCL13O43927 AC005702.4-201ENST00000618393 416 ntBASIC14.27□□□□□ -0.13
CXCL13O43927 AC004840.1-201ENST00000636359 365 ntBASIC14.27□□□□□ -0.13
CXCL13O43927 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.27□□□□□ -0.13
CXCL13O43927 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
CXCL13O43927 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
CXCL13O43927 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CXCL13O43927 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.13
CXCL13O43927 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.27□□□□□ -0.13
CXCL13O43927 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 AC026691.1-201ENST00000602502 2017 ntBASIC14.27□□□□□ -0.13
CXCL13O43927 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.27□□□□□ -0.13
CXCL13O43927 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
CXCL13O43927 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL13O43927 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.26□□□□□ -0.13
CXCL13O43927 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.26□□□□□ -0.13
CXCL13O43927 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL13O43927 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CXCL13O43927 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL13O43927 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL13O43927 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.26□□□□□ -0.13
CXCL13O43927 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CXCL13O43927 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 AC236430.1-201ENST00000402231 743 ntBASIC14.26□□□□□ -0.13
CXCL13O43927 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL13O43927 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.26□□□□□ -0.13
CXCL13O43927 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.26□□□□□ -0.13
CXCL13O43927 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL13O43927 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.26□□□□□ -0.13
CXCL13O43927 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CXCL13O43927 RN7SL204P-201ENST00000582831 262 ntBASIC14.26□□□□□ -0.13
CXCL13O43927 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CXCL13O43927 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL13O43927 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CXCL13O43927 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CXCL13O43927 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.26□□□□□ -0.13
CXCL13O43927 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL13O43927 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 PCDHA1-201ENST00000378133 2726 ntBASIC14.26□□□□□ -0.13
CXCL13O43927 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.26□□□□□ -0.13
CXCL13O43927 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.26□□□□□ -0.13
CXCL13O43927 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL13O43927 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CXCL13O43927 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CXCL13O43927 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.25□□□□□ -0.13
CXCL13O43927 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CXCL13O43927 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CXCL13O43927 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL13O43927 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL13O43927 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CXCL13O43927 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL13O43927 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL13O43927 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL13O43927 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL13O43927 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL13O43927 AC112504.1-201ENST00000623415 1841 ntBASIC14.25□□□□□ -0.13
CXCL13O43927 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL13O43927 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL13O43927 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL13O43927 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
CXCL13O43927 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms