Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.11■□□□□ 0.17
KDELR3O43731 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KDELR3O43731 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KDELR3O43731 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KDELR3O43731 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KDELR3O43731 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KDELR3O43731 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KDELR3O43731 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
KDELR3O43731 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KDELR3O43731 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.11■□□□□ 0.17
KDELR3O43731 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
KDELR3O43731 AC015922.1-201ENST00000421102 1152 ntBASIC16.11■□□□□ 0.17
KDELR3O43731 KRT18P64-201ENST00000434946 1219 ntBASIC16.11■□□□□ 0.17
KDELR3O43731 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.11■□□□□ 0.17
KDELR3O43731 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.11■□□□□ 0.17
KDELR3O43731 SLED1-202ENST00000512051 380 ntBASIC16.11■□□□□ 0.17
KDELR3O43731 DOC2GP-202ENST00000514950 1163 ntBASIC16.11■□□□□ 0.17
KDELR3O43731 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.11■□□□□ 0.17
KDELR3O43731 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.11■□□□□ 0.17
KDELR3O43731 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.11■□□□□ 0.17
KDELR3O43731 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.11■□□□□ 0.17
KDELR3O43731 AC004790.1-201ENST00000612686 536 ntBASIC16.11■□□□□ 0.17
KDELR3O43731 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.11■□□□□ 0.17
KDELR3O43731 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
KDELR3O43731 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KDELR3O43731 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KDELR3O43731 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KDELR3O43731 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.11■□□□□ 0.17
KDELR3O43731 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KDELR3O43731 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
KDELR3O43731 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KDELR3O43731 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.11■□□□□ 0.17
KDELR3O43731 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KDELR3O43731 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.11■□□□□ 0.17
KDELR3O43731 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
KDELR3O43731 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
KDELR3O43731 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
KDELR3O43731 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.1■□□□□ 0.17
KDELR3O43731 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.1■□□□□ 0.17
KDELR3O43731 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.1■□□□□ 0.17
KDELR3O43731 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.1■□□□□ 0.17
KDELR3O43731 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.1■□□□□ 0.17
KDELR3O43731 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
KDELR3O43731 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 GNAQP1-201ENST00000444815 1067 ntBASIC16.1■□□□□ 0.17
KDELR3O43731 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.1■□□□□ 0.17
KDELR3O43731 AL589987.1-201ENST00000453380 819 ntBASIC16.1■□□□□ 0.17
KDELR3O43731 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.1■□□□□ 0.17
KDELR3O43731 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.1■□□□□ 0.17
KDELR3O43731 MEIS3P1-201ENST00000495167 958 ntBASIC16.1■□□□□ 0.17
KDELR3O43731 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.1■□□□□ 0.17
KDELR3O43731 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.1■□□□□ 0.17
KDELR3O43731 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.1■□□□□ 0.17
KDELR3O43731 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.1■□□□□ 0.17
KDELR3O43731 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.1■□□□□ 0.17
KDELR3O43731 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
KDELR3O43731 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.1■□□□□ 0.17
KDELR3O43731 MIR3197-201ENST00000582241 73 ntBASIC16.1■□□□□ 0.17
KDELR3O43731 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.1■□□□□ 0.17
KDELR3O43731 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KDELR3O43731 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
KDELR3O43731 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KDELR3O43731 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.1■□□□□ 0.17
KDELR3O43731 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.1■□□□□ 0.17
KDELR3O43731 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
KDELR3O43731 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.1■□□□□ 0.17
KDELR3O43731 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KDELR3O43731 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KDELR3O43731 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
KDELR3O43731 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KDELR3O43731 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KDELR3O43731 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
KDELR3O43731 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KDELR3O43731 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.09■□□□□ 0.17
KDELR3O43731 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KDELR3O43731 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KDELR3O43731 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
KDELR3O43731 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KDELR3O43731 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
KDELR3O43731 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KDELR3O43731 TNRC18P3-201ENST00000441896 2691 ntBASIC16.09■□□□□ 0.17
KDELR3O43731 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KDELR3O43731 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KDELR3O43731 SPDYE19P-201ENST00000338590 713 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms