Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.94■□□□□ 0.3
HOXA2O43364 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.94■□□□□ 0.3
HOXA2O43364 AL355994.2-201ENST00000447882 704 ntBASIC16.94■□□□□ 0.3
HOXA2O43364 AC093433.1-201ENST00000458048 571 ntBASIC16.94■□□□□ 0.3
HOXA2O43364 FAM8A2P-201ENST00000528813 1142 ntBASIC16.94■□□□□ 0.3
HOXA2O43364 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA2O43364 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
HOXA2O43364 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
HOXA2O43364 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXA2O43364 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA2O43364 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA2O43364 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA2O43364 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA2O43364 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.94■□□□□ 0.3
HOXA2O43364 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HOXA2O43364 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXA2O43364 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.94■□□□□ 0.3
HOXA2O43364 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.93■□□□□ 0.3
HOXA2O43364 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HOXA2O43364 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXA2O43364 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXA2O43364 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.93■□□□□ 0.3
HOXA2O43364 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXA2O43364 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HOXA2O43364 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXA2O43364 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
HOXA2O43364 C2orf27AP3-201ENST00000434123 579 ntBASIC16.93■□□□□ 0.3
HOXA2O43364 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
HOXA2O43364 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXA2O43364 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HOXA2O43364 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXA2O43364 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.93■□□□□ 0.3
HOXA2O43364 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.93■□□□□ 0.3
HOXA2O43364 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
HOXA2O43364 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXA2O43364 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.93■□□□□ 0.3
HOXA2O43364 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.93■□□□□ 0.3
HOXA2O43364 RN7SL219P-201ENST00000582872 296 ntBASIC16.93■□□□□ 0.3
HOXA2O43364 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXA2O43364 AL354718.3-201ENST00000616414 581 ntBASIC16.93■□□□□ 0.3
HOXA2O43364 CR382287.1-201ENST00000623954 586 ntBASIC16.93■□□□□ 0.3
HOXA2O43364 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXA2O43364 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.93■□□□□ 0.3
HOXA2O43364 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.93■□□□□ 0.3
HOXA2O43364 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
HOXA2O43364 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.93■□□□□ 0.3
HOXA2O43364 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.93■□□□□ 0.3
HOXA2O43364 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HOXA2O43364 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA2O43364 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA2O43364 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA2O43364 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA2O43364 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA2O43364 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXA2O43364 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXA2O43364 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
HOXA2O43364 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXA2O43364 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXA2O43364 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXA2O43364 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXA2O43364 YBX1P6-201ENST00000442962 1002 ntBASIC16.92■□□□□ 0.3
HOXA2O43364 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.92■□□□□ 0.3
HOXA2O43364 FTH1P14-201ENST00000482930 551 ntBASIC16.92■□□□□ 0.3
HOXA2O43364 AC022137.2-201ENST00000503482 481 ntBASIC16.92■□□□□ 0.3
HOXA2O43364 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXA2O43364 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.92■□□□□ 0.3
HOXA2O43364 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.92■□□□□ 0.3
HOXA2O43364 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXA2O43364 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA2O43364 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXA2O43364 DRD5P1-201ENST00000456605 1438 ntBASIC16.92■□□□□ 0.3
HOXA2O43364 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA2O43364 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA2O43364 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HOXA2O43364 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HOXA2O43364 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA2O43364 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HOXA2O43364 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA2O43364 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA2O43364 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
HOXA2O43364 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.92■□□□□ 0.3
HOXA2O43364 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms