Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
FOXN1O15353 KRT8P22-201ENST00000562317 1415 ntBASIC18.99■□□□□ 0.63
FOXN1O15353 KRT8P49-201ENST00000604166 1432 ntBASIC18.99■□□□□ 0.63
FOXN1O15353 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
FOXN1O15353 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.99■□□□□ 0.63
FOXN1O15353 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN1O15353 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.98■□□□□ 0.63
FOXN1O15353 AC026691.1-201ENST00000602502 2017 ntBASIC18.98■□□□□ 0.63
FOXN1O15353 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXN1O15353 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
FOXN1O15353 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
FOXN1O15353 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN1O15353 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN1O15353 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXN1O15353 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN1O15353 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXN1O15353 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN1O15353 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN1O15353 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN1O15353 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXN1O15353 AC026954.1-201ENST00000429771 1293 ntBASIC18.98■□□□□ 0.63
FOXN1O15353 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC18.98■□□□□ 0.63
FOXN1O15353 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN1O15353 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.98■□□□□ 0.63
FOXN1O15353 CHMP4BP1-201ENST00000556017 588 ntBASIC18.98■□□□□ 0.63
FOXN1O15353 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXN1O15353 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXN1O15353 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN1O15353 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN1O15353 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXN1O15353 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXN1O15353 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN1O15353 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
FOXN1O15353 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.98■□□□□ 0.63
FOXN1O15353 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN1O15353 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN1O15353 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN1O15353 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
FOXN1O15353 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.97■□□□□ 0.63
FOXN1O15353 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN1O15353 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN1O15353 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
FOXN1O15353 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXN1O15353 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN1O15353 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.97■□□□□ 0.63
FOXN1O15353 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXN1O15353 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXN1O15353 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
FOXN1O15353 PCDHA1-201ENST00000378133 2726 ntBASIC18.97■□□□□ 0.63
FOXN1O15353 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
FOXN1O15353 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN1O15353 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN1O15353 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN1O15353 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN1O15353 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN1O15353 SNX33P1-201ENST00000592116 1762 ntBASIC18.97■□□□□ 0.63
FOXN1O15353 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN1O15353 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
FOXN1O15353 FNTAP2-201ENST00000430308 634 ntBASIC18.97■□□□□ 0.63
FOXN1O15353 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC18.97■□□□□ 0.63
FOXN1O15353 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN1O15353 AL162726.2-201ENST00000438986 1017 ntBASIC18.97■□□□□ 0.63
FOXN1O15353 SCARNA20.5-201ENST00000516991 142 ntBASIC18.97■□□□□ 0.63
FOXN1O15353 DUX4L45-201ENST00000566406 1057 ntBASIC18.97■□□□□ 0.63
FOXN1O15353 AC092337.1-201ENST00000568699 1129 ntBASIC18.97■□□□□ 0.63
FOXN1O15353 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC18.97■□□□□ 0.63
FOXN1O15353 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXN1O15353 CU634019.7-201ENST00000624153 1185 ntBASIC18.97■□□□□ 0.63
FOXN1O15353 FP236241.2-201ENST00000624906 1185 ntBASIC18.97■□□□□ 0.63
FOXN1O15353 AP001350.2-201ENST00000625104 1094 ntBASIC18.97■□□□□ 0.63
FOXN1O15353 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.97■□□□□ 0.63
FOXN1O15353 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN1O15353 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.97■□□□□ 0.63
FOXN1O15353 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
FOXN1O15353 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
FOXN1O15353 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXN1O15353 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN1O15353 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN1O15353 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
FOXN1O15353 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.97■□□□□ 0.63
FOXN1O15353 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
FOXN1O15353 AC138028.6-201ENST00000616106 1482 ntBASIC18.97■□□□□ 0.63
FOXN1O15353 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
FOXN1O15353 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
FOXN1O15353 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXN1O15353 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 AL021920.2-201ENST00000624828 1351 ntBASIC18.96■□□□□ 0.63
FOXN1O15353 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
FOXN1O15353 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
FOXN1O15353 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18.96■□□□□ 0.63
FOXN1O15353 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
FOXN1O15353 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms