Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
RTL8CO15255 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RTL8CO15255 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
RTL8CO15255 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC10.59□□□□□ -0.71
RTL8CO15255 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
RTL8CO15255 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
RTL8CO15255 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
RTL8CO15255 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC10.59□□□□□ -0.71
RTL8CO15255 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC10.59□□□□□ -0.71
RTL8CO15255 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
RTL8CO15255 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RTL8CO15255 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
RTL8CO15255 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
RTL8CO15255 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RTL8CO15255 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
RTL8CO15255 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
RTL8CO15255 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
RTL8CO15255 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
RTL8CO15255 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
RTL8CO15255 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC10.58□□□□□ -0.72
RTL8CO15255 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC10.58□□□□□ -0.72
RTL8CO15255 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
RTL8CO15255 INTS4P2-202ENST00000614726 2019 ntBASIC10.58□□□□□ -0.72
RTL8CO15255 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC10.58□□□□□ -0.72
RTL8CO15255 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC10.58□□□□□ -0.72
RTL8CO15255 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC10.58□□□□□ -0.72
RTL8CO15255 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
RTL8CO15255 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 ZBTB12BP-201ENST00000314232 1122 ntBASIC10.58□□□□□ -0.72
RTL8CO15255 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
RTL8CO15255 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 MPV17-206ENST00000402722 827 ntTSL 3 BASIC10.58□□□□□ -0.72
RTL8CO15255 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC10.58□□□□□ -0.72
RTL8CO15255 AC074338.1-201ENST00000416825 156 ntBASIC10.58□□□□□ -0.72
RTL8CO15255 SOCS2P1-201ENST00000417727 557 ntBASIC10.58□□□□□ -0.72
RTL8CO15255 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC10.58□□□□□ -0.72
RTL8CO15255 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC10.58□□□□□ -0.72
RTL8CO15255 RPL13AP20-201ENST00000459725 609 ntBASIC10.58□□□□□ -0.72
RTL8CO15255 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC10.58□□□□□ -0.72
RTL8CO15255 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC10.58□□□□□ -0.72
RTL8CO15255 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC10.58□□□□□ -0.72
RTL8CO15255 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 RIT1-205ENST00000539040 919 ntTSL 2 BASIC10.58□□□□□ -0.72
RTL8CO15255 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC10.58□□□□□ -0.72
RTL8CO15255 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC10.58□□□□□ -0.72
RTL8CO15255 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC10.58□□□□□ -0.72
RTL8CO15255 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC10.58□□□□□ -0.72
RTL8CO15255 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
RTL8CO15255 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
RTL8CO15255 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC10.58□□□□□ -0.72
RTL8CO15255 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
RTL8CO15255 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC10.58□□□□□ -0.72
RTL8CO15255 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC10.58□□□□□ -0.72
RTL8CO15255 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
RTL8CO15255 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC10.57□□□□□ -0.72
RTL8CO15255 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC10.57□□□□□ -0.72
RTL8CO15255 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
RTL8CO15255 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTL8CO15255 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTL8CO15255 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC10.57□□□□□ -0.72
RTL8CO15255 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC10.57□□□□□ -0.72
RTL8CO15255 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC10.57□□□□□ -0.72
RTL8CO15255 RERG-209ENST00000546331 1383 ntTSL 2 BASIC10.57□□□□□ -0.72
RTL8CO15255 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
RTL8CO15255 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC10.57□□□□□ -0.72
RTL8CO15255 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
RTL8CO15255 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC10.57□□□□□ -0.72
RTL8CO15255 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC10.57□□□□□ -0.72
RTL8CO15255 AC092506.1-202ENST00000401022 528 ntBASIC10.57□□□□□ -0.72
RTL8CO15255 BAATP1-201ENST00000412284 1225 ntBASIC10.57□□□□□ -0.72
RTL8CO15255 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC10.57□□□□□ -0.72
RTL8CO15255 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC10.57□□□□□ -0.72
RTL8CO15255 AC026954.1-201ENST00000429771 1293 ntBASIC10.57□□□□□ -0.72
RTL8CO15255 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC10.57□□□□□ -0.72
RTL8CO15255 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
RTL8CO15255 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms