Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CHD1O14646 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
CHD1O14646 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC25.01■■□□□ 1.59
CHD1O14646 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC25.01■■□□□ 1.59
CHD1O14646 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC25.01■■□□□ 1.59
CHD1O14646 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC25.01■■□□□ 1.59
CHD1O14646 DGAT2L7P-201ENST00000602462 744 ntBASIC25.01■■□□□ 1.59
CHD1O14646 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
CHD1O14646 AL161773.1-201ENST00000624845 863 ntBASIC25.01■■□□□ 1.59
CHD1O14646 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHD1O14646 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC25.01■■□□□ 1.59
CHD1O14646 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC25.01■■□□□ 1.59
CHD1O14646 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
CHD1O14646 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC25.01■■□□□ 1.59
CHD1O14646 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
CHD1O14646 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC25.01■■□□□ 1.59
CHD1O14646 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC25.01■■□□□ 1.59
CHD1O14646 AMT-204ENST00000427987 1646 ntTSL 5 BASIC25.01■■□□□ 1.59
CHD1O14646 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC25.01■■□□□ 1.59
CHD1O14646 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHD1O14646 AC018892.3-201ENST00000623986 2499 ntBASIC25■■□□□ 1.59
CHD1O14646 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHD1O14646 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC25■■□□□ 1.59
CHD1O14646 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC25■■□□□ 1.59
CHD1O14646 SNORD3B-2-202ENST00000571722 791 ntBASIC25■■□□□ 1.59
CHD1O14646 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC25■■□□□ 1.59
CHD1O14646 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC25■■□□□ 1.59
CHD1O14646 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC25■■□□□ 1.59
CHD1O14646 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC25■■□□□ 1.59
CHD1O14646 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC25■■□□□ 1.59
CHD1O14646 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
CHD1O14646 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
CHD1O14646 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHD1O14646 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
CHD1O14646 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHD1O14646 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHD1O14646 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC25■■□□□ 1.59
CHD1O14646 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
CHD1O14646 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC25■■□□□ 1.59
CHD1O14646 AC018463.1-201ENST00000456674 917 ntBASIC25■■□□□ 1.59
CHD1O14646 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC25■■□□□ 1.59
CHD1O14646 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC25■■□□□ 1.59
CHD1O14646 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC25■■□□□ 1.59
CHD1O14646 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC25■■□□□ 1.59
CHD1O14646 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC25■■□□□ 1.59
CHD1O14646 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC25■■□□□ 1.59
CHD1O14646 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC25■■□□□ 1.59
CHD1O14646 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CHD1O14646 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC24.99■■□□□ 1.59
CHD1O14646 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC24.99■■□□□ 1.59
CHD1O14646 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CHD1O14646 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CHD1O14646 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CHD1O14646 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CHD1O14646 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC24.99■■□□□ 1.59
CHD1O14646 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC24.99■■□□□ 1.59
CHD1O14646 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC24.99■■□□□ 1.59
CHD1O14646 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC24.99■■□□□ 1.59
CHD1O14646 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC24.99■■□□□ 1.59
CHD1O14646 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
CHD1O14646 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC24.99■■□□□ 1.59
CHD1O14646 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
CHD1O14646 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC24.99■■□□□ 1.59
CHD1O14646 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
CHD1O14646 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CHD1O14646 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
CHD1O14646 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CHD1O14646 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC24.99■■□□□ 1.59
CHD1O14646 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
CHD1O14646 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC24.98■■□□□ 1.59
CHD1O14646 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHD1O14646 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CHD1O14646 RPS15-201ENST00000233609 534 ntTSL 2 BASIC24.98■■□□□ 1.59
CHD1O14646 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CHD1O14646 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC24.98■■□□□ 1.59
CHD1O14646 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC24.98■■□□□ 1.59
CHD1O14646 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC24.98■■□□□ 1.59
CHD1O14646 C2orf69P1-201ENST00000563532 1093 ntBASIC24.98■■□□□ 1.59
CHD1O14646 RPS15-205ENST00000586686 562 ntTSL 5 BASIC24.98■■□□□ 1.59
CHD1O14646 RPS15-208ENST00000591804 711 ntTSL 5 BASIC24.98■■□□□ 1.59
CHD1O14646 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHD1O14646 AL109837.1-201ENST00000603272 613 ntBASIC24.98■■□□□ 1.59
CHD1O14646 KRT8P21-201ENST00000430398 1491 ntBASIC24.98■■□□□ 1.59
CHD1O14646 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
CHD1O14646 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHD1O14646 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CHD1O14646 MFF-204ENST00000353339 2186 ntTSL 5 BASIC24.98■■□□□ 1.59
CHD1O14646 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CHD1O14646 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CHD1O14646 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CHD1O14646 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHD1O14646 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CHD1O14646 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CHD1O14646 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CHD1O14646 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CHD1O14646 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC24.98■■□□□ 1.59
CHD1O14646 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
CHD1O14646 TPM1-223ENST00000560445 485 ntTSL 3 BASIC24.98■■□□□ 1.59
CHD1O14646 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC24.98■■□□□ 1.59
CHD1O14646 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms