Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
UPK1AO00322 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.14■□□□□ 0.01
UPK1AO00322 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
UPK1AO00322 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.14■□□□□ 0.01
UPK1AO00322 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.14■□□□□ 0.01
UPK1AO00322 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
UPK1AO00322 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
UPK1AO00322 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.14■□□□□ 0.01
UPK1AO00322 AC090616.6-203ENST00000579186 1945 ntBASIC15.14■□□□□ 0.01
UPK1AO00322 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 AC105250.1-201ENST00000509378 2057 ntBASIC15.14■□□□□ 0.01
UPK1AO00322 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
UPK1AO00322 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.14■□□□□ 0.01
UPK1AO00322 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.14■□□□□ 0.01
UPK1AO00322 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.14■□□□□ 0.01
UPK1AO00322 BX842568.4-201ENST00000421222 227 ntBASIC15.14■□□□□ 0.01
UPK1AO00322 AL592309.1-201ENST00000443127 649 ntBASIC15.14■□□□□ 0.01
UPK1AO00322 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.14■□□□□ 0.01
UPK1AO00322 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
UPK1AO00322 AC069335.1-201ENST00000489972 472 ntBASIC15.14■□□□□ 0.01
UPK1AO00322 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.14■□□□□ 0.01
UPK1AO00322 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.14■□□□□ 0.01
UPK1AO00322 AC061975.2-201ENST00000581722 295 ntBASIC15.14■□□□□ 0.01
UPK1AO00322 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
UPK1AO00322 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.14■□□□□ 0.01
UPK1AO00322 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
UPK1AO00322 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.14■□□□□ 0.01
UPK1AO00322 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.14■□□□□ 0.01
UPK1AO00322 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.14■□□□□ 0.01
UPK1AO00322 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
UPK1AO00322 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 AC026748.1-201ENST00000624349 3251 ntBASIC15.14■□□□□ 0.01
UPK1AO00322 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.14■□□□□ 0.01
UPK1AO00322 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
UPK1AO00322 AC091951.1-201ENST00000512854 2465 ntBASIC15.14■□□□□ 0.01
UPK1AO00322 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.14■□□□□ 0.01
UPK1AO00322 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
UPK1AO00322 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
UPK1AO00322 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1AO00322 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1AO00322 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1AO00322 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.13■□□□□ 0.01
UPK1AO00322 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.13■□□□□ 0.01
UPK1AO00322 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.13■□□□□ 0.01
UPK1AO00322 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1AO00322 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1AO00322 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1AO00322 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
UPK1AO00322 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1AO00322 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1AO00322 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1AO00322 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.13■□□□□ 0.01
UPK1AO00322 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.13■□□□□ 0.01
UPK1AO00322 RPSAP43-201ENST00000402237 625 ntBASIC15.13■□□□□ 0.01
UPK1AO00322 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.13■□□□□ 0.01
UPK1AO00322 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.13■□□□□ 0.01
UPK1AO00322 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.13■□□□□ 0.01
UPK1AO00322 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.13■□□□□ 0.01
UPK1AO00322 AC112482.1-201ENST00000492080 688 ntBASIC15.13■□□□□ 0.01
UPK1AO00322 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.13■□□□□ 0.01
UPK1AO00322 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1AO00322 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1AO00322 AC024267.1-201ENST00000582320 895 ntBASIC15.13■□□□□ 0.01
UPK1AO00322 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.13■□□□□ 0.01
UPK1AO00322 AC010327.4-202ENST00000591484 748 ntBASIC15.13■□□□□ 0.01
UPK1AO00322 AC022145.2-201ENST00000598203 171 ntBASIC15.13■□□□□ 0.01
UPK1AO00322 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.13■□□□□ 0.01
UPK1AO00322 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.13■□□□□ 0.01
UPK1AO00322 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
UPK1AO00322 AC084121.4-201ENST00000641598 221 ntBASIC15.13■□□□□ 0.01
UPK1AO00322 AF228730.8-201ENST00000642140 221 ntBASIC15.13■□□□□ 0.01
UPK1AO00322 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.13■□□□□ 0.01
UPK1AO00322 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
UPK1AO00322 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
UPK1AO00322 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
UPK1AO00322 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.13■□□□□ 0.01
UPK1AO00322 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
UPK1AO00322 CICP23-201ENST00000605013 2741 ntBASIC15.13■□□□□ 0.01
UPK1AO00322 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.13■□□□□ 0.01
UPK1AO00322 AC112693.3-201ENST00000624819 1983 ntBASIC15.13■□□□□ 0.01
UPK1AO00322 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms