Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.3■□□□□ 0.04
PDLIM1O00151 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.3■□□□□ 0.04
PDLIM1O00151 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.3■□□□□ 0.04
PDLIM1O00151 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.3■□□□□ 0.04
PDLIM1O00151 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
PDLIM1O00151 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.3■□□□□ 0.04
PDLIM1O00151 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.3■□□□□ 0.04
PDLIM1O00151 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 MIR7706-201ENST00000613747 67 ntBASIC15.3■□□□□ 0.04
PDLIM1O00151 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.3■□□□□ 0.04
PDLIM1O00151 AL589182.2-201ENST00000619332 1049 ntBASIC15.3■□□□□ 0.04
PDLIM1O00151 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PDLIM1O00151 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PDLIM1O00151 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
PDLIM1O00151 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
PDLIM1O00151 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.3■□□□□ 0.04
PDLIM1O00151 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
PDLIM1O00151 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.29■□□□□ 0.04
PDLIM1O00151 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
PDLIM1O00151 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.29■□□□□ 0.04
PDLIM1O00151 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.29■□□□□ 0.04
PDLIM1O00151 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
PDLIM1O00151 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.29■□□□□ 0.04
PDLIM1O00151 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.29■□□□□ 0.04
PDLIM1O00151 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.29■□□□□ 0.04
PDLIM1O00151 OR7E14P-202ENST00000530490 1290 ntBASIC15.29■□□□□ 0.04
PDLIM1O00151 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.29■□□□□ 0.04
PDLIM1O00151 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.29■□□□□ 0.04
PDLIM1O00151 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.29■□□□□ 0.04
PDLIM1O00151 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PDLIM1O00151 AP001005.1-201ENST00000571755 1248 ntBASIC15.29■□□□□ 0.04
PDLIM1O00151 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
PDLIM1O00151 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.29■□□□□ 0.04
PDLIM1O00151 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.29■□□□□ 0.04
PDLIM1O00151 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PDLIM1O00151 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 REXO1L1P-202ENST00000608646 1974 ntBASIC15.29■□□□□ 0.04
PDLIM1O00151 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.29■□□□□ 0.04
PDLIM1O00151 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.29■□□□□ 0.04
PDLIM1O00151 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
PDLIM1O00151 AC091951.1-201ENST00000512854 2465 ntBASIC15.28■□□□□ 0.04
PDLIM1O00151 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.28■□□□□ 0.04
PDLIM1O00151 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.28■□□□□ 0.04
PDLIM1O00151 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PDLIM1O00151 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.28■□□□□ 0.04
PDLIM1O00151 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
PDLIM1O00151 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.28■□□□□ 0.04
PDLIM1O00151 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 RPS2P28-201ENST00000314255 741 ntBASIC15.28■□□□□ 0.04
PDLIM1O00151 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.28■□□□□ 0.04
PDLIM1O00151 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 KRT18P27-201ENST00000427733 1299 ntBASIC15.28■□□□□ 0.04
PDLIM1O00151 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.28■□□□□ 0.04
PDLIM1O00151 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC15.28■□□□□ 0.04
PDLIM1O00151 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.28■□□□□ 0.04
PDLIM1O00151 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PDLIM1O00151 AL049840.3-201ENST00000602669 611 ntBASIC15.28■□□□□ 0.04
PDLIM1O00151 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.28■□□□□ 0.04
PDLIM1O00151 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.28■□□□□ 0.04
PDLIM1O00151 AC008735.5-201ENST00000623544 497 ntBASIC15.28■□□□□ 0.04
PDLIM1O00151 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.28■□□□□ 0.04
PDLIM1O00151 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PDLIM1O00151 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms