Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 BAATP1-201ENST00000412284 1225 ntBASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 AC022137.2-201ENST00000503482 481 ntBASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 MFF-223ENST00000524634 647 ntTSL 2 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 AC093813.1-201ENST00000605066 256 ntBASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
CCDC144AA2RUR9 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC22.64■■□□□ 1.22
CCDC144AA2RUR9 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CCDC144AA2RUR9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC22.64■■□□□ 1.22
CCDC144AA2RUR9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CCDC144AA2RUR9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
CCDC144AA2RUR9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC22.64■■□□□ 1.22
CCDC144AA2RUR9 AC112504.1-201ENST00000623415 1841 ntBASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 BNIP3P42-201ENST00000454982 569 ntBASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 IFT20-206ENST00000578122 834 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 IFT20-208ENST00000578985 831 ntTSL 3 BASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 BNIP3P29-201ENST00000598302 571 ntBASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 AC011447.5-201ENST00000616168 564 ntBASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC22.64■■□□□ 1.21
CCDC144AA2RUR9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 AC092933.1-201ENST00000393644 945 ntBASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 AL603832.2-201ENST00000566195 2125 ntBASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 AC024909.3-201ENST00000611513 2257 ntBASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
CCDC144AA2RUR9 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 AC079328.2-201ENST00000561241 3354 ntBASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 AC093433.1-201ENST00000458048 571 ntBASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 AC092658.1-201ENST00000505836 891 ntBASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
CCDC144AA2RUR9 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC22.62■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms