Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 AC134407.2-201ENST00000625089 1978 ntBASIC14.31□□□□□ -0.12
COPS3Q9UNS2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
COPS3Q9UNS2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COPS3Q9UNS2 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
COPS3Q9UNS2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.31□□□□□ -0.12
COPS3Q9UNS2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COPS3Q9UNS2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
COPS3Q9UNS2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COPS3Q9UNS2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.31□□□□□ -0.12
COPS3Q9UNS2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 AL031284.1-201ENST00000419297 478 ntBASIC14.3□□□□□ -0.12
COPS3Q9UNS2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 RHOQP3-201ENST00000437982 621 ntBASIC14.3□□□□□ -0.12
COPS3Q9UNS2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 AC096734.2-201ENST00000562054 433 ntBASIC14.3□□□□□ -0.12
COPS3Q9UNS2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 AL773604.1-201ENST00000617417 272 ntBASIC14.3□□□□□ -0.12
COPS3Q9UNS2 AL031008.1-201ENST00000619963 541 ntBASIC14.3□□□□□ -0.12
COPS3Q9UNS2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 AC116407.3-201ENST00000623905 1129 ntBASIC14.3□□□□□ -0.12
COPS3Q9UNS2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 AC092127.1-201ENST00000567093 3455 ntBASIC14.3□□□□□ -0.12
COPS3Q9UNS2 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
COPS3Q9UNS2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 MIR4321-201ENST00000592276 80 ntBASIC14.29□□□□□ -0.12
COPS3Q9UNS2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC14.29□□□□□ -0.12
COPS3Q9UNS2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms