Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 AC112693.3-201ENST00000624819 1983 ntBASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 MYO15B-237ENST00000642007 4893 ntBASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 TCAF2P1-201ENST00000291129 2421 ntBASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
CDC42SE2Q9NRR3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CDC42SE2Q9NRR3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.02□□□□□ -0.64
CDC42SE2Q9NRR3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
CDC42SE2Q9NRR3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.02□□□□□ -0.64
CDC42SE2Q9NRR3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.02□□□□□ -0.64
CDC42SE2Q9NRR3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CDC42SE2Q9NRR3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CDC42SE2Q9NRR3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.02□□□□□ -0.64
CDC42SE2Q9NRR3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
CDC42SE2Q9NRR3 C18orf15-201ENST00000623680 2534 ntBASIC11.02□□□□□ -0.64
CDC42SE2Q9NRR3 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC11.02□□□□□ -0.64
CDC42SE2Q9NRR3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
CDC42SE2Q9NRR3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC11.02□□□□□ -0.64
CDC42SE2Q9NRR3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CDC42SE2Q9NRR3 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
CDC42SE2Q9NRR3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
CDC42SE2Q9NRR3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC11.02□□□□□ -0.64
CDC42SE2Q9NRR3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 AC098831.1-202ENST00000438821 336 ntBASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 AC009947.1-201ENST00000444350 727 ntBASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 AC243562.2-201ENST00000561247 970 ntBASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 AC010507.1-201ENST00000633895 436 ntBASIC11.02□□□□□ -0.65
CDC42SE2Q9NRR3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms