Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 CBFB-203ENST00000561924 584 ntTSL 5 BASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 AL031432.2-201ENST00000566714 459 ntBASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 AL928711.1-201ENST00000570165 459 ntBASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 AC067750.1-201ENST00000608826 6545 ntBASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 DKFZP434A062-201ENST00000573103 5021 ntBASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
PCDHB16Q9NRJ7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 AC005252.3-201ENST00000623855 2258 ntBASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 AC005089.1-201ENST00000619486 2241 ntBASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 EMBP1-201ENST00000458200 901 ntBASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 UNC93B7-201ENST00000509439 705 ntBASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 AL662844.1-201ENST00000546340 181 ntBASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 LINC02447-202ENST00000501888 2146 ntBASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
PCDHB16Q9NRJ7 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 CDC14C-201ENST00000428251 1719 ntBASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 AC007686.3-201ENST00000619017 3487 ntBASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.98□□□□□ -0.17
PCDHB16Q9NRJ7 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms