Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 SPDYE11-202ENST00000450699 704 ntBASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 RNA5SP410-201ENST00000516285 106 ntBASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 KRT8P23-201ENST00000560090 1207 ntBASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 SPDYE9P-201ENST00000570642 692 ntBASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 AC026120.1-201ENST00000611536 926 ntBASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 SPDYE10P-202ENST00000612005 668 ntBASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 SPDYE8P-202ENST00000612377 668 ntBASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NEUROD4Q9HD90 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 MKNK2P1-201ENST00000437526 628 ntBASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 IGHV3-62-201ENST00000520057 340 ntBASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 AP000842.3-202ENST00000569238 1080 ntBASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NEUROD4Q9HD90 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 AL691432.1-201ENST00000596308 1422 ntBASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 AC020658.6-201ENST00000623564 1870 ntBASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 AC004987.2-201ENST00000395959 1148 ntBASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 C20orf181-201ENST00000623918 480 ntBASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
NEUROD4Q9HD90 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms