Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 SPTLC1P1-201ENST00000447199 261 ntBASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 PHKG1P2-201ENST00000457537 863 ntBASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 ZNF890P-202ENST00000530367 1156 ntBASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 AC025048.3-201ENST00000590609 569 ntBASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 AC004790.1-201ENST00000612686 536 ntBASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 AC005702.4-201ENST00000618393 416 ntBASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.48■□□□□ 0.55
VAT1LQ9HCJ6 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 BTBD7P1-201ENST00000447253 1453 ntBASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 SPDYE19P-201ENST00000338590 713 ntBASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 AL589987.1-201ENST00000453380 819 ntBASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
VAT1LQ9HCJ6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 AC007541.1-201ENST00000570282 1469 ntBASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 AC114501.2-201ENST00000439631 535 ntBASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 COX20P2-201ENST00000452636 358 ntBASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
VAT1LQ9HCJ6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms