Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 AKAP8P1-201ENST00000434743 1349 ntBASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 AC098483.1-201ENST00000438623 955 ntTSL 5 BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 MIR4453-201ENST00000584019 89 ntBASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SCAF1Q9H7N4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 AP006294.1-201ENST00000415407 339 ntBASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 TSSK5P-201ENST00000423978 907 ntBASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 STK19B-204ENST00000512515 211 ntBASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 AC009268.1-201ENST00000561352 1203 ntBASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
SCAF1Q9H7N4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 AC092933.1-201ENST00000393644 945 ntBASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 DGCR5-201ENST00000399539 862 ntBASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 KRT8P23-201ENST00000560090 1207 ntBASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SCAF1Q9H7N4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 MIR4259-201ENST00000584466 101 ntBASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 MIR6787-201ENST00000616675 61 ntBASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
SCAF1Q9H7N4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms