Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 SLED1-202ENST00000512051 380 ntBASIC18.54■□□□□ 0.56
SH2D4AQ9H788 IGHV3-71-201ENST00000523324 359 ntBASIC18.54■□□□□ 0.56
SH2D4AQ9H788 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 MIR6752-201ENST00000618442 71 ntBASIC18.54■□□□□ 0.56
SH2D4AQ9H788 AL033527.5-201ENST00000641382 801 ntBASIC18.54■□□□□ 0.56
SH2D4AQ9H788 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SH2D4AQ9H788 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 TOMM22P5-201ENST00000416399 439 ntBASIC18.53■□□□□ 0.56
SH2D4AQ9H788 AC074338.1-201ENST00000416825 156 ntBASIC18.53■□□□□ 0.56
SH2D4AQ9H788 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 AL442647.2-201ENST00000429864 857 ntBASIC18.53■□□□□ 0.56
SH2D4AQ9H788 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SH2D4AQ9H788 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 AC136604.1-201ENST00000418535 575 ntBASIC18.52■□□□□ 0.56
SH2D4AQ9H788 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SH2D4AQ9H788 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SH2D4AQ9H788 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SH2D4AQ9H788 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
SH2D4AQ9H788 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SH2D4AQ9H788 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.55
SH2D4AQ9H788 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SH2D4AQ9H788 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.51■□□□□ 0.55
SH2D4AQ9H788 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms