Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
NXF3Q9H4D5 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 TMEM14DP-201ENST00000422205 345 ntBASIC17.14■□□□□ 0.33
NXF3Q9H4D5 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 AC244107.1-201ENST00000442033 332 ntBASIC17.14■□□□□ 0.33
NXF3Q9H4D5 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 AC124067.4-201ENST00000519691 2379 ntBASIC17.14■□□□□ 0.33
NXF3Q9H4D5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.14■□□□□ 0.33
NXF3Q9H4D5 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 TTTY23B-201ENST00000442790 549 ntBASIC17.13■□□□□ 0.33
NXF3Q9H4D5 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 FAM86LP-201ENST00000478302 853 ntBASIC17.13■□□□□ 0.33
NXF3Q9H4D5 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NXF3Q9H4D5 PCDHB19P-201ENST00000570871 2371 ntBASIC17.13■□□□□ 0.33
NXF3Q9H4D5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NXF3Q9H4D5 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms