Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 AL133267.1-201ENST00000398220 340 ntBASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RTFDC1Q9BY42 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC19.14■□□□□ 0.66
RTFDC1Q9BY42 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RTFDC1Q9BY42 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 RNA5SP423-201ENST00000517127 109 ntBASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 AP001582.1-201ENST00000525856 295 ntBASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 AL008638.5-201ENST00000623814 1298 ntBASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 PPA1-206ENST00000625364 644 ntTSL 5 BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RTFDC1Q9BY42 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 AC026471.1-201ENST00000564629 3026 ntBASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 AC092506.1-202ENST00000401022 528 ntBASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 AC104306.2-201ENST00000451877 341 ntBASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 OARD1-212ENST00000482515 832 ntTSL 2 BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 AC106872.11-201ENST00000605838 421 ntBASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 AC145423.3-201ENST00000615987 467 ntBASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
RTFDC1Q9BY42 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 AHCYP2-201ENST00000430630 1300 ntBASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 RPS3-201ENST00000278572 907 ntTSL 3 BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RTFDC1Q9BY42 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms