Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 AC136604.1-201ENST00000418535 575 ntBASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 MTDHP5-201ENST00000598980 586 ntBASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 AL133215.2-201ENST00000609242 977 ntBASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
RSPO3Q9BXY4 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 IGHV3-62-201ENST00000520057 340 ntBASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 AC068418.2-201ENST00000577309 3703 ntBASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RSPO3Q9BXY4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 CICP23-201ENST00000605013 2741 ntBASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 CEND1P1-201ENST00000451006 455 ntBASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RSPO3Q9BXY4 ALG1L8P-201ENST00000533887 760 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms