Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.36□□□□□ -0.11
TRAF4Q9BUZ4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 AC092474.2-201ENST00000424288 719 ntBASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 FAM58DP-201ENST00000428076 619 ntBASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 CNN2P2-201ENST00000443536 909 ntBASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 BCRP1-201ENST00000444246 691 ntBASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 CNN2P3-201ENST00000450201 906 ntBASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 IGHV3-62-201ENST00000520057 340 ntBASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 AL096865.1-201ENST00000606796 927 ntBASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 AL136317.3-201ENST00000618497 906 ntBASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
TRAF4Q9BUZ4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 RNU1-129P-201ENST00000384064 167 ntBASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 HLA-J-202ENST00000469281 1241 ntBASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 AL512356.2-201ENST00000546955 174 ntBASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 KRT8P23-201ENST00000560090 1207 ntBASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 U1.21-201ENST00000580816 167 ntBASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 AC005498.2-205ENST00000593218 784 ntBASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 AP001059.3-201ENST00000619053 235 ntBASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAF4Q9BUZ4 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.33□□□□□ -0.11
TRAF4Q9BUZ4 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAF4Q9BUZ4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms