Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC11.2□□□□□ -0.62
UPK3BQ9BT76 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 AL589702.1-201ENST00000641229 1509 ntBASIC11.19□□□□□ -0.62
UPK3BQ9BT76 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 AC055876.3-201ENST00000431496 288 ntBASIC11.19□□□□□ -0.62
UPK3BQ9BT76 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.19□□□□□ -0.62
UPK3BQ9BT76 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 POU5F1P6-201ENST00000466990 990 ntBASIC11.19□□□□□ -0.62
UPK3BQ9BT76 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 RNA5SP410-201ENST00000516285 106 ntBASIC11.19□□□□□ -0.62
UPK3BQ9BT76 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 SPCS2P1-201ENST00000561636 679 ntBASIC11.19□□□□□ -0.62
UPK3BQ9BT76 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 MIR4453-201ENST00000584019 89 ntBASIC11.19□□□□□ -0.62
UPK3BQ9BT76 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 AL096865.1-201ENST00000606796 927 ntBASIC11.19□□□□□ -0.62
UPK3BQ9BT76 AL365330.1-201ENST00000607459 531 ntBASIC11.19□□□□□ -0.62
UPK3BQ9BT76 AC138649.4-201ENST00000612222 287 ntBASIC11.19□□□□□ -0.62
UPK3BQ9BT76 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 AC138969.2-201ENST00000532739 9932 ntBASIC11.19□□□□□ -0.62
UPK3BQ9BT76 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 AC026691.1-201ENST00000602502 2017 ntBASIC11.19□□□□□ -0.62
UPK3BQ9BT76 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 U82695.1-201ENST00000635752 1889 ntBASIC11.19□□□□□ -0.62
UPK3BQ9BT76 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
UPK3BQ9BT76 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC11.18□□□□□ -0.62
UPK3BQ9BT76 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.18□□□□□ -0.62
UPK3BQ9BT76 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms