Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 AC142381.1-201ENST00000426099 345 ntBASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 AC093214.1-201ENST00000511688 1107 ntBASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 RARRES2P9-201ENST00000565168 469 ntBASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 AC073389.1-201ENST00000595595 795 ntBASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 AC099063.4-201ENST00000641099 1602 ntBASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 AC007326.2-201ENST00000624224 7579 ntBASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
PCGF1Q9BSM1 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 AP3S2-216ENST00000617003 1561 ntBASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 MTHFR-217ENST00000641820 1569 ntBASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 RNA5SP410-201ENST00000516285 106 ntBASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 MIR4453-201ENST00000584019 89 ntBASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 AC015911.4-201ENST00000588022 1070 ntBASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 SPTSSB-204ENST00000617024 1292 ntBASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
PCGF1Q9BSM1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
PCGF1Q9BSM1 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms