Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SMOQ99835 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMOQ99835 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMOQ99835 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.66■□□□□ 0.26
SMOQ99835 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SMOQ99835 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMOQ99835 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.66■□□□□ 0.26
SMOQ99835 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SMOQ99835 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SMOQ99835 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.66■□□□□ 0.26
SMOQ99835 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMOQ99835 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
SMOQ99835 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMOQ99835 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.65■□□□□ 0.26
SMOQ99835 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMOQ99835 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMOQ99835 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMOQ99835 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SMOQ99835 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMOQ99835 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMOQ99835 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMOQ99835 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SMOQ99835 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SMOQ99835 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.65■□□□□ 0.26
SMOQ99835 TOMM22P5-201ENST00000416399 439 ntBASIC16.65■□□□□ 0.26
SMOQ99835 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.65■□□□□ 0.26
SMOQ99835 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.65■□□□□ 0.26
SMOQ99835 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.65■□□□□ 0.26
SMOQ99835 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.65■□□□□ 0.26
SMOQ99835 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.65■□□□□ 0.26
SMOQ99835 AC055876.2-201ENST00000531834 546 ntBASIC16.65■□□□□ 0.26
SMOQ99835 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.65■□□□□ 0.26
SMOQ99835 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.65■□□□□ 0.26
SMOQ99835 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.65■□□□□ 0.26
SMOQ99835 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.65■□□□□ 0.26
SMOQ99835 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.65■□□□□ 0.26
SMOQ99835 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SMOQ99835 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.65■□□□□ 0.26
SMOQ99835 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SMOQ99835 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SMOQ99835 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMOQ99835 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
SMOQ99835 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.65■□□□□ 0.26
SMOQ99835 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.64■□□□□ 0.26
SMOQ99835 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.64■□□□□ 0.25
SMOQ99835 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
SMOQ99835 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMOQ99835 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.64■□□□□ 0.25
SMOQ99835 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMOQ99835 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.64■□□□□ 0.25
SMOQ99835 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SMOQ99835 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SMOQ99835 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMOQ99835 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMOQ99835 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMOQ99835 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SMOQ99835 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMOQ99835 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMOQ99835 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SMOQ99835 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.64■□□□□ 0.25
SMOQ99835 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMOQ99835 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMOQ99835 TP53TG3HP-202ENST00000569755 579 ntBASIC16.64■□□□□ 0.25
SMOQ99835 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
SMOQ99835 AL158212.4-201ENST00000624062 1286 ntBASIC16.64■□□□□ 0.25
SMOQ99835 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMOQ99835 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMOQ99835 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMOQ99835 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.64■□□□□ 0.25
SMOQ99835 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.64■□□□□ 0.25
SMOQ99835 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
SMOQ99835 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
SMOQ99835 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMOQ99835 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SMOQ99835 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SMOQ99835 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMOQ99835 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMOQ99835 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMOQ99835 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.64■□□□□ 0.25
SMOQ99835 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.63■□□□□ 0.25
SMOQ99835 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.63■□□□□ 0.25
SMOQ99835 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.63■□□□□ 0.25
SMOQ99835 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SMOQ99835 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SMOQ99835 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
SMOQ99835 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.63■□□□□ 0.25
SMOQ99835 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.63■□□□□ 0.25
SMOQ99835 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.63■□□□□ 0.25
SMOQ99835 MEP1AP4-201ENST00000423244 1087 ntBASIC16.63■□□□□ 0.25
SMOQ99835 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.63■□□□□ 0.25
SMOQ99835 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms