Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.7■□□□□ 0.1
NPAS2Q99743 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS2Q99743 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS2Q99743 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NPAS2Q99743 AC087641.1-201ENST00000557561 1021 ntBASIC15.7■□□□□ 0.1
NPAS2Q99743 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.7■□□□□ 0.1
NPAS2Q99743 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC15.7■□□□□ 0.1
NPAS2Q99743 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.7■□□□□ 0.1
NPAS2Q99743 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS2Q99743 AC091812.2-201ENST00000619081 385 ntBASIC15.7■□□□□ 0.1
NPAS2Q99743 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS2Q99743 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS2Q99743 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.7■□□□□ 0.1
NPAS2Q99743 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NPAS2Q99743 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NPAS2Q99743 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
NPAS2Q99743 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS2Q99743 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS2Q99743 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NPAS2Q99743 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS2Q99743 AC138035.3-201ENST00000622706 2791 ntBASIC15.69■□□□□ 0.1
NPAS2Q99743 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NPAS2Q99743 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NPAS2Q99743 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NPAS2Q99743 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
NPAS2Q99743 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.69■□□□□ 0.1
NPAS2Q99743 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS2Q99743 AP002472.1-201ENST00000577490 586 ntBASIC15.69■□□□□ 0.1
NPAS2Q99743 AC068137.2-201ENST00000605408 478 ntBASIC15.69■□□□□ 0.1
NPAS2Q99743 AL596442.2-201ENST00000610240 980 ntBASIC15.69■□□□□ 0.1
NPAS2Q99743 AP001350.2-201ENST00000625104 1094 ntBASIC15.69■□□□□ 0.1
NPAS2Q99743 AC092902.6-201ENST00000641783 218 ntBASIC15.69■□□□□ 0.1
NPAS2Q99743 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NPAS2Q99743 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NPAS2Q99743 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.69■□□□□ 0.1
NPAS2Q99743 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NPAS2Q99743 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
NPAS2Q99743 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.69■□□□□ 0.1
NPAS2Q99743 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NPAS2Q99743 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.68■□□□□ 0.1
NPAS2Q99743 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NPAS2Q99743 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 TMBIM7P-203ENST00000641617 1718 ntBASIC15.68■□□□□ 0.1
NPAS2Q99743 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.68■□□□□ 0.1
NPAS2Q99743 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 AC067930.6-201ENST00000623257 4947 ntBASIC15.68■□□□□ 0.1
NPAS2Q99743 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
NPAS2Q99743 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
NPAS2Q99743 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NPAS2Q99743 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.68■□□□□ 0.1
NPAS2Q99743 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NPAS2Q99743 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.68■□□□□ 0.1
NPAS2Q99743 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.68■□□□□ 0.1
NPAS2Q99743 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.68■□□□□ 0.1
NPAS2Q99743 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.68■□□□□ 0.1
NPAS2Q99743 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms