Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.23■□□□□ 0.03
CGREF1Q99674 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CGREF1Q99674 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.23■□□□□ 0.03
CGREF1Q99674 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CGREF1Q99674 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.23■□□□□ 0.03
CGREF1Q99674 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CGREF1Q99674 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.22■□□□□ 0.03
CGREF1Q99674 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.22■□□□□ 0.03
CGREF1Q99674 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
CGREF1Q99674 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 CICP24-201ENST00000605464 2705 ntBASIC15.22■□□□□ 0.03
CGREF1Q99674 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
CGREF1Q99674 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.22■□□□□ 0.03
CGREF1Q99674 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.22■□□□□ 0.03
CGREF1Q99674 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 AC092910.1-201ENST00000482027 1129 ntBASIC15.22■□□□□ 0.03
CGREF1Q99674 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.22■□□□□ 0.03
CGREF1Q99674 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.22■□□□□ 0.03
CGREF1Q99674 AL121912.1-201ENST00000603683 238 ntBASIC15.22■□□□□ 0.03
CGREF1Q99674 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CGREF1Q99674 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.22■□□□□ 0.03
CGREF1Q99674 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 SNX18-202ENST00000343017 3140 ntBASIC15.22■□□□□ 0.03
CGREF1Q99674 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.22■□□□□ 0.03
CGREF1Q99674 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CGREF1Q99674 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.22■□□□□ 0.03
CGREF1Q99674 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CGREF1Q99674 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CGREF1Q99674 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CGREF1Q99674 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CGREF1Q99674 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.21■□□□□ 0.03
CGREF1Q99674 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CGREF1Q99674 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.21■□□□□ 0.03
CGREF1Q99674 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CGREF1Q99674 PMS2P7-201ENST00000506558 1336 ntBASIC15.21■□□□□ 0.03
CGREF1Q99674 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CGREF1Q99674 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
CGREF1Q99674 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
CGREF1Q99674 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.21■□□□□ 0.03
CGREF1Q99674 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CGREF1Q99674 WASH6P-202ENST00000359512 1437 ntBASIC15.21■□□□□ 0.03
CGREF1Q99674 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.21■□□□□ 0.03
CGREF1Q99674 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.21■□□□□ 0.03
CGREF1Q99674 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.21■□□□□ 0.03
CGREF1Q99674 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CGREF1Q99674 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CGREF1Q99674 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.21■□□□□ 0.03
CGREF1Q99674 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CGREF1Q99674 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.21■□□□□ 0.03
CGREF1Q99674 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.21■□□□□ 0.03
CGREF1Q99674 UNC93B7-201ENST00000509439 705 ntBASIC15.21■□□□□ 0.03
CGREF1Q99674 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CGREF1Q99674 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.21■□□□□ 0.03
CGREF1Q99674 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CGREF1Q99674 AC148477.8-201ENST00000624298 468 ntBASIC15.21■□□□□ 0.03
CGREF1Q99674 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CGREF1Q99674 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
CGREF1Q99674 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CGREF1Q99674 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CGREF1Q99674 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CGREF1Q99674 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.21■□□□□ 0.03
CGREF1Q99674 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
CGREF1Q99674 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
CGREF1Q99674 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CGREF1Q99674 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.21■□□□□ 0.02
CGREF1Q99674 AC091951.1-201ENST00000512854 2465 ntBASIC15.21■□□□□ 0.02
CGREF1Q99674 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.21■□□□□ 0.02
CGREF1Q99674 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.21■□□□□ 0.02
CGREF1Q99674 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.21■□□□□ 0.02
CGREF1Q99674 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CGREF1Q99674 AL359258.3-201ENST00000622910 2331 ntBASIC15.21■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms