Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 RN7SL219P-201ENST00000582872 296 ntBASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 MIR4321-201ENST00000592276 80 ntBASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 AC133539.2-201ENST00000604757 467 ntBASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 AL365330.1-201ENST00000607459 531 ntBASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 MIR6869-201ENST00000619434 62 ntBASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 PDIA3P1-201ENST00000471856 1510 ntBASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SLC46A1Q96NT5 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 AC093525.8-201ENST00000624099 1342 ntBASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 MIR1908-201ENST00000410394 80 ntBASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 ACTG1P3-201ENST00000431775 1114 ntBASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 AL162726.2-201ENST00000438986 1017 ntBASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 MIR6787-201ENST00000616675 61 ntBASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 AL592424.1-201ENST00000563624 1536 ntBASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
SLC46A1Q96NT5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.21■□□□□ 0.02
SLC46A1Q96NT5 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC46A1Q96NT5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
SLC46A1Q96NT5 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC46A1Q96NT5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.21■□□□□ 0.02
SLC46A1Q96NT5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
SLC46A1Q96NT5 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC46A1Q96NT5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC46A1Q96NT5 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
SLC46A1Q96NT5 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 AC036164.1-201ENST00000570544 333 ntBASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 AL391069.4-201ENST00000609583 481 ntBASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 AL022328.1-201ENST00000610050 478 ntBASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SLC46A1Q96NT5 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms