Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 IGHV3-71-201ENST00000523324 359 ntBASIC18.48■□□□□ 0.55
CCDC17Q96LX7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 AL049840.4-201ENST00000602422 811 ntBASIC18.48■□□□□ 0.55
CCDC17Q96LX7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 CU634019.7-201ENST00000624153 1185 ntBASIC18.48■□□□□ 0.55
CCDC17Q96LX7 FP236241.2-201ENST00000624906 1185 ntBASIC18.48■□□□□ 0.55
CCDC17Q96LX7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CCDC17Q96LX7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 AC112492.5-201ENST00000421897 457 ntBASIC18.47■□□□□ 0.55
CCDC17Q96LX7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 ACTG1P3-201ENST00000431775 1114 ntBASIC18.47■□□□□ 0.55
CCDC17Q96LX7 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 ACA64.2-201ENST00000459014 129 ntBASIC18.47■□□□□ 0.55
CCDC17Q96LX7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 RAB43P1-201ENST00000561790 589 ntBASIC18.47■□□□□ 0.55
CCDC17Q96LX7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 AC124283.3-201ENST00000570869 594 ntBASIC18.47■□□□□ 0.55
CCDC17Q96LX7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 AL008721.1-201ENST00000609964 604 ntBASIC18.47■□□□□ 0.55
CCDC17Q96LX7 RPSAP52-203ENST00000622976 1023 ntBASIC18.47■□□□□ 0.55
CCDC17Q96LX7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC17Q96LX7 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 PGF-202ENST00000405431 666 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 SOCS2P1-201ENST00000417727 557 ntBASIC18.46■□□□□ 0.55
CCDC17Q96LX7 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 HILS1-202ENST00000545329 423 ntBASIC18.46■□□□□ 0.55
CCDC17Q96LX7 AC120045.2-201ENST00000567334 178 ntBASIC18.46■□□□□ 0.55
CCDC17Q96LX7 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 AC008735.3-201ENST00000596646 500 ntBASIC18.46■□□□□ 0.55
CCDC17Q96LX7 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC17Q96LX7 CYP2T1P-202ENST00000641596 2535 ntBASIC18.46■□□□□ 0.55
CCDC17Q96LX7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC17Q96LX7 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
CCDC17Q96LX7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC17Q96LX7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC17Q96LX7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms