Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 AC008738.7-201ENST00000609744 511 ntBASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 AC134407.2-201ENST00000625089 1978 ntBASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
UBE2E2Q96LR5 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 AC006449.5-201ENST00000610658 2098 ntBASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 REXO1L1P-202ENST00000608646 1974 ntBASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 CYP2T1P-202ENST00000641596 2535 ntBASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 PHKG1P2-201ENST00000457537 863 ntBASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 AC138761.1-201ENST00000584393 385 ntBASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 AC025048.3-201ENST00000590609 569 ntBASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 AL450472.2-201ENST00000603663 1156 ntBASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 AC005702.4-201ENST00000618393 416 ntBASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC12.36□□□□□ -0.43
UBE2E2Q96LR5 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
UBE2E2Q96LR5 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC12.35□□□□□ -0.43
UBE2E2Q96LR5 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC12.35□□□□□ -0.43
UBE2E2Q96LR5 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
UBE2E2Q96LR5 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC12.35□□□□□ -0.43
UBE2E2Q96LR5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.35□□□□□ -0.43
UBE2E2Q96LR5 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2E2Q96LR5 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2E2Q96LR5 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC12.35□□□□□ -0.43
UBE2E2Q96LR5 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2E2Q96LR5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
UBE2E2Q96LR5 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms