Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.25■□□□□ 0.19
RTP4Q96DX8 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.25■□□□□ 0.19
RTP4Q96DX8 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.25■□□□□ 0.19
RTP4Q96DX8 AC093028.1-201ENST00000622998 982 ntBASIC16.25■□□□□ 0.19
RTP4Q96DX8 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTP4Q96DX8 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTP4Q96DX8 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTP4Q96DX8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTP4Q96DX8 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
RTP4Q96DX8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTP4Q96DX8 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.25■□□□□ 0.19
RTP4Q96DX8 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RTP4Q96DX8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTP4Q96DX8 KRT8P44-201ENST00000441609 1350 ntBASIC16.25■□□□□ 0.19
RTP4Q96DX8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.25■□□□□ 0.19
RTP4Q96DX8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.25■□□□□ 0.19
RTP4Q96DX8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RTP4Q96DX8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RTP4Q96DX8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RTP4Q96DX8 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTP4Q96DX8 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTP4Q96DX8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTP4Q96DX8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTP4Q96DX8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTP4Q96DX8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 AC011270.2-201ENST00000624293 2550 ntBASIC16.24■□□□□ 0.19
RTP4Q96DX8 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTP4Q96DX8 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTP4Q96DX8 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTP4Q96DX8 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTP4Q96DX8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTP4Q96DX8 ALG1L8P-201ENST00000533887 760 ntBASIC16.24■□□□□ 0.19
RTP4Q96DX8 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RTP4Q96DX8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTP4Q96DX8 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RTP4Q96DX8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RTP4Q96DX8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RTP4Q96DX8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.23■□□□□ 0.19
RTP4Q96DX8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.23■□□□□ 0.19
RTP4Q96DX8 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RTP4Q96DX8 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.23■□□□□ 0.19
RTP4Q96DX8 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
RTP4Q96DX8 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.23■□□□□ 0.19
RTP4Q96DX8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.23■□□□□ 0.19
RTP4Q96DX8 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 SPDYE17-201ENST00000412399 783 ntBASIC16.23■□□□□ 0.19
RTP4Q96DX8 FAM58DP-201ENST00000428076 619 ntBASIC16.23■□□□□ 0.19
RTP4Q96DX8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.23■□□□□ 0.19
RTP4Q96DX8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.23■□□□□ 0.19
RTP4Q96DX8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.23■□□□□ 0.19
RTP4Q96DX8 AC093520.2-201ENST00000561830 333 ntBASIC16.23■□□□□ 0.19
RTP4Q96DX8 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.23■□□□□ 0.19
RTP4Q96DX8 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.23■□□□□ 0.19
RTP4Q96DX8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RTP4Q96DX8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RTP4Q96DX8 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RTP4Q96DX8 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
RTP4Q96DX8 TNRC18P2-201ENST00000417666 2714 ntBASIC16.23■□□□□ 0.19
RTP4Q96DX8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RTP4Q96DX8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.22■□□□□ 0.19
RTP4Q96DX8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RTP4Q96DX8 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms