Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 AP001282.1-201ENST00000531301 1499 ntBASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM43Q96BQ3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 COX5BP1-201ENST00000507622 393 ntBASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 AL354989.2-201ENST00000435838 1540 ntBASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 AL138799.1-201ENST00000448213 1675 ntBASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRIM43Q96BQ3 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
TRIM43Q96BQ3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM43Q96BQ3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM43Q96BQ3 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM43Q96BQ3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM43Q96BQ3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM43Q96BQ3 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.08■□□□□ 0.33
TRIM43Q96BQ3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM43Q96BQ3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM43Q96BQ3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
TRIM43Q96BQ3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.08■□□□□ 0.33
TRIM43Q96BQ3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM43Q96BQ3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRIM43Q96BQ3 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 MIR769-201ENST00000390225 118 ntBASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 AL133466.1-201ENST00000447582 150 ntBASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 AC138649.2-201ENST00000615886 705 ntBASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 UBALD1-205ENST00000590891 2641 ntBASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.08■□□□□ 0.32
TRIM43Q96BQ3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
TRIM43Q96BQ3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms