Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 AL022342.1-201ENST00000400363 863 ntBASIC14.39□□□□□ -0.11
PTP4A1Q93096 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 KRT18P58-201ENST00000527480 1120 ntBASIC14.39□□□□□ -0.11
PTP4A1Q93096 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 AL122018.1-201ENST00000446607 2310 ntBASIC14.39□□□□□ -0.11
PTP4A1Q93096 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 AC009090.5-201ENST00000624886 2285 ntBASIC14.39□□□□□ -0.11
PTP4A1Q93096 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PTP4A1Q93096 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PTP4A1Q93096 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 MIR574-201ENST00000385209 96 ntBASIC14.38□□□□□ -0.11
PTP4A1Q93096 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.38□□□□□ -0.11
PTP4A1Q93096 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 PRYP6-201ENST00000514804 343 ntBASIC14.38□□□□□ -0.11
PTP4A1Q93096 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 WASH6P-202ENST00000359512 1437 ntBASIC14.38□□□□□ -0.11
PTP4A1Q93096 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 AC018892.3-201ENST00000623986 2499 ntBASIC14.38□□□□□ -0.11
PTP4A1Q93096 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
PTP4A1Q93096 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.38□□□□□ -0.11
PTP4A1Q93096 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PTP4A1Q93096 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
PTP4A1Q93096 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms