Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
USP9XQ93008 PDIA3P2-201ENST00000428073 158 ntBASIC13.68□□□□□ -0.22
USP9XQ93008 Z97180.1-201ENST00000445173 988 ntBASIC13.68□□□□□ -0.22
USP9XQ93008 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC13.68□□□□□ -0.22
USP9XQ93008 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC13.68□□□□□ -0.22
USP9XQ93008 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.68□□□□□ -0.22
USP9XQ93008 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.68□□□□□ -0.22
USP9XQ93008 AC243562.2-201ENST00000561247 970 ntBASIC13.68□□□□□ -0.22
USP9XQ93008 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
USP9XQ93008 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13.68□□□□□ -0.22
USP9XQ93008 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.68□□□□□ -0.22
USP9XQ93008 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.68□□□□□ -0.22
USP9XQ93008 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
USP9XQ93008 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
USP9XQ93008 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
USP9XQ93008 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
USP9XQ93008 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
USP9XQ93008 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
USP9XQ93008 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
USP9XQ93008 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
USP9XQ93008 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
USP9XQ93008 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.68□□□□□ -0.22
USP9XQ93008 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
USP9XQ93008 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
USP9XQ93008 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
USP9XQ93008 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
USP9XQ93008 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
USP9XQ93008 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.68□□□□□ -0.22
USP9XQ93008 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
USP9XQ93008 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
USP9XQ93008 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.68□□□□□ -0.22
USP9XQ93008 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
USP9XQ93008 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
USP9XQ93008 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
USP9XQ93008 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
USP9XQ93008 FGFR3P1-201ENST00000449999 601 ntBASIC13.68□□□□□ -0.22
USP9XQ93008 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.68□□□□□ -0.22
USP9XQ93008 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC13.68□□□□□ -0.22
USP9XQ93008 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.68□□□□□ -0.22
USP9XQ93008 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
USP9XQ93008 EIF5AP2-201ENST00000585668 1047 ntBASIC13.68□□□□□ -0.22
USP9XQ93008 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
USP9XQ93008 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.68□□□□□ -0.22
USP9XQ93008 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.67□□□□□ -0.22
USP9XQ93008 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.67□□□□□ -0.22
USP9XQ93008 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC13.67□□□□□ -0.22
USP9XQ93008 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC13.67□□□□□ -0.22
USP9XQ93008 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
USP9XQ93008 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC13.67□□□□□ -0.22
USP9XQ93008 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 RN7SL8P-201ENST00000461771 266 ntBASIC13.67□□□□□ -0.22
USP9XQ93008 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC13.67□□□□□ -0.22
USP9XQ93008 DNM1P30-201ENST00000563586 452 ntBASIC13.67□□□□□ -0.22
USP9XQ93008 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.67□□□□□ -0.22
USP9XQ93008 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC13.67□□□□□ -0.22
USP9XQ93008 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.67□□□□□ -0.22
USP9XQ93008 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
USP9XQ93008 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.67□□□□□ -0.22
USP9XQ93008 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.67□□□□□ -0.22
USP9XQ93008 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
USP9XQ93008 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.67□□□□□ -0.22
USP9XQ93008 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.67□□□□□ -0.22
USP9XQ93008 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.67□□□□□ -0.22
USP9XQ93008 AP003171.2-201ENST00000528208 925 ntBASIC13.67□□□□□ -0.22
USP9XQ93008 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 AC138894.2-201ENST00000602838 371 ntBASIC13.67□□□□□ -0.22
USP9XQ93008 AC073413.1-201ENST00000603927 732 ntBASIC13.67□□□□□ -0.22
USP9XQ93008 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
USP9XQ93008 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
USP9XQ93008 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
USP9XQ93008 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
USP9XQ93008 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
USP9XQ93008 UBALD1-205ENST00000590891 2641 ntBASIC13.66□□□□□ -0.22
USP9XQ93008 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
USP9XQ93008 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
USP9XQ93008 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
USP9XQ93008 POU5F1P6-201ENST00000466990 990 ntBASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms