Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.13□□□□□ -0.15
AP3S1Q92572 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.13□□□□□ -0.15
AP3S1Q92572 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
AP3S1Q92572 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.13□□□□□ -0.15
AP3S1Q92572 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.13□□□□□ -0.15
AP3S1Q92572 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.13□□□□□ -0.15
AP3S1Q92572 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC14.13□□□□□ -0.15
AP3S1Q92572 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 BX664615.1-201ENST00000443558 458 ntBASIC14.13□□□□□ -0.15
AP3S1Q92572 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.13□□□□□ -0.15
AP3S1Q92572 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.13□□□□□ -0.15
AP3S1Q92572 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.13□□□□□ -0.15
AP3S1Q92572 AL160237.2-201ENST00000556165 472 ntBASIC14.13□□□□□ -0.15
AP3S1Q92572 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.13□□□□□ -0.15
AP3S1Q92572 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
AP3S1Q92572 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
AP3S1Q92572 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
AP3S1Q92572 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
AP3S1Q92572 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
AP3S1Q92572 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
AP3S1Q92572 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.13□□□□□ -0.15
AP3S1Q92572 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.13□□□□□ -0.15
AP3S1Q92572 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.13□□□□□ -0.15
AP3S1Q92572 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
AP3S1Q92572 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
AP3S1Q92572 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.12□□□□□ -0.15
AP3S1Q92572 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.12□□□□□ -0.15
AP3S1Q92572 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
AP3S1Q92572 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
AP3S1Q92572 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.12□□□□□ -0.15
AP3S1Q92572 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.12□□□□□ -0.15
AP3S1Q92572 AC087163.2-201ENST00000457299 853 ntBASIC14.12□□□□□ -0.15
AP3S1Q92572 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.12□□□□□ -0.15
AP3S1Q92572 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.12□□□□□ -0.15
AP3S1Q92572 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.12□□□□□ -0.15
AP3S1Q92572 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.12□□□□□ -0.15
AP3S1Q92572 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC14.12□□□□□ -0.15
AP3S1Q92572 AF228730.7-201ENST00000641842 219 ntBASIC14.12□□□□□ -0.15
AP3S1Q92572 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.12□□□□□ -0.15
AP3S1Q92572 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.12□□□□□ -0.15
AP3S1Q92572 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.12□□□□□ -0.15
AP3S1Q92572 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
AP3S1Q92572 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
AP3S1Q92572 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
AP3S1Q92572 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
AP3S1Q92572 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.11□□□□□ -0.15
AP3S1Q92572 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.11□□□□□ -0.15
AP3S1Q92572 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S1Q92572 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S1Q92572 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S1Q92572 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
AP3S1Q92572 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
AP3S1Q92572 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S1Q92572 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S1Q92572 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
AP3S1Q92572 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.11□□□□□ -0.15
AP3S1Q92572 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms