Protein–RNA interactions for Protein: Q8TDI8

TMC1, Transmembrane channel-like protein 1, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1Q8TDI8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 AC008894.3-201ENST00000624324 3103 ntBASIC22.19■■□□□ 1.14
TMC1Q8TDI8 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
TMC1Q8TDI8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 DGCR5-201ENST00000399539 862 ntBASIC22.18■■□□□ 1.14
TMC1Q8TDI8 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 COX5BP8-201ENST00000416911 349 ntBASIC22.18■■□□□ 1.14
TMC1Q8TDI8 FXR1-221ENST00000491674 365 ntTSL 2 BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
TMC1Q8TDI8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 FO393414.2-201ENST00000405153 598 ntBASIC22.17■■□□□ 1.14
TMC1Q8TDI8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 TPRX2P-201ENST00000535362 881 ntBASIC22.17■■□□□ 1.14
TMC1Q8TDI8 AC023310.3-201ENST00000557027 670 ntBASIC22.17■■□□□ 1.14
TMC1Q8TDI8 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 AC100756.1-201ENST00000562736 682 ntBASIC22.17■■□□□ 1.14
TMC1Q8TDI8 AC138749.3-201ENST00000567691 622 ntBASIC22.17■■□□□ 1.14
TMC1Q8TDI8 AC025048.3-201ENST00000590609 569 ntBASIC22.17■■□□□ 1.14
TMC1Q8TDI8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 AC008494.3-201ENST00000606615 944 ntBASIC22.17■■□□□ 1.14
TMC1Q8TDI8 AC116165.1-201ENST00000611806 668 ntBASIC22.17■■□□□ 1.14
TMC1Q8TDI8 5S_rRNA.22-201ENST00000614916 106 ntBASIC22.17■■□□□ 1.14
TMC1Q8TDI8 AC005702.4-201ENST00000618393 416 ntBASIC22.17■■□□□ 1.14
TMC1Q8TDI8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
TMC1Q8TDI8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC22.16■■□□□ 1.14
TMC1Q8TDI8 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TMC1Q8TDI8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
TMC1Q8TDI8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
TMC1Q8TDI8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms