Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
NUP43Q8NFH3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
NUP43Q8NFH3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUP43Q8NFH3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
NUP43Q8NFH3 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUP43Q8NFH3 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUP43Q8NFH3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
NUP43Q8NFH3 AC018892.3-201ENST00000623986 2499 ntBASIC14.97□□□□□ -0.01
NUP43Q8NFH3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 HYMAI-201ENST00000635591 3347 ntBASIC14.96□□□□□ -0.01
NUP43Q8NFH3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
NUP43Q8NFH3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NUP43Q8NFH3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
NUP43Q8NFH3 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NUP43Q8NFH3 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
NUP43Q8NFH3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.95□□□□□ -0.02
NUP43Q8NFH3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 KRT8P37-201ENST00000451609 1420 ntBASIC14.95□□□□□ -0.02
NUP43Q8NFH3 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 AL353705.2-201ENST00000428243 662 ntBASIC14.95□□□□□ -0.02
NUP43Q8NFH3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 AC018529.1-201ENST00000613063 361 ntBASIC14.95□□□□□ -0.02
NUP43Q8NFH3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 AC092850.2-201ENST00000623821 2697 ntBASIC14.95□□□□□ -0.02
NUP43Q8NFH3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NUP43Q8NFH3 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NUP43Q8NFH3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms