Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf42Q8N5U0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf42Q8N5U0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf42Q8N5U0 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.39□□□□□ -0.27
C11orf42Q8N5U0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
C11orf42Q8N5U0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.39□□□□□ -0.27
C11orf42Q8N5U0 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 AC092183.1-201ENST00000469884 875 ntBASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 AC109322.1-201ENST00000524499 1264 ntBASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 AL512356.2-201ENST00000546955 174 ntBASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 RARRES2P9-201ENST00000565168 469 ntBASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 AC061975.2-201ENST00000581722 295 ntBASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 AP001059.3-201ENST00000619053 235 ntBASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 AC099063.4-201ENST00000641099 1602 ntBASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
C11orf42Q8N5U0 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 MTHFR-217ENST00000641820 1569 ntBASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 AC006449.6-201ENST00000612330 2296 ntBASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 HLA-H-201ENST00000383620 1096 ntBASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 TSEN15P1-201ENST00000423257 515 ntBASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
C11orf42Q8N5U0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms