Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AF238378.1-201ENST00000526806 358 ntBASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 AL356488.2-201ENST00000602755 427 ntBASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 AL645728.2-201ENST00000641974 660 ntBASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
NUDCD3Q8IVD9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 AKR1C7P-201ENST00000305623 895 ntBASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 CXCL1P1-201ENST00000502804 216 ntBASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.92■□□□□ 0.14
NUDCD3Q8IVD9 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 AC134407.2-201ENST00000625089 1978 ntBASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 AL513480.1-201ENST00000451731 511 ntBASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 AC108073.2-201ENST00000464002 357 ntBASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 LINC01711-201ENST00000598340 967 ntBASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC15.91■□□□□ 0.14
NUDCD3Q8IVD9 AC008735.5-201ENST00000623544 497 ntBASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms