Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CSMD3Q7Z407 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSMD3Q7Z407 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
CSMD3Q7Z407 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
CSMD3Q7Z407 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC10.9□□□□□ -0.66
CSMD3Q7Z407 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
CSMD3Q7Z407 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC10.9□□□□□ -0.67
CSMD3Q7Z407 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
CSMD3Q7Z407 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CSMD3Q7Z407 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
CSMD3Q7Z407 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 PRKXP1-201ENST00000561423 1122 ntBASIC10.89□□□□□ -0.67
CSMD3Q7Z407 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 AC092364.2-201ENST00000596710 2692 ntBASIC10.89□□□□□ -0.67
CSMD3Q7Z407 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 ACKR1-201ENST00000368121 1240 ntBASIC10.89□□□□□ -0.67
CSMD3Q7Z407 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 ACTG1P2-201ENST00000415776 1125 ntBASIC10.89□□□□□ -0.67
CSMD3Q7Z407 ACTG1P11-201ENST00000425411 1125 ntBASIC10.89□□□□□ -0.67
CSMD3Q7Z407 HOMER2P2-201ENST00000451621 847 ntBASIC10.89□□□□□ -0.67
CSMD3Q7Z407 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 EEF1DP6-201ENST00000449232 372 ntBASIC10.89□□□□□ -0.67
CSMD3Q7Z407 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 AC073413.1-201ENST00000603927 732 ntBASIC10.89□□□□□ -0.67
CSMD3Q7Z407 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CSMD3Q7Z407 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 RPL13AP19-201ENST00000434320 584 ntBASIC10.88□□□□□ -0.67
CSMD3Q7Z407 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CSMD3Q7Z407 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms