Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 AC104306.2-201ENST00000451877 341 ntBASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 AC105129.2-201ENST00000559536 390 ntBASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 AC008687.7-202ENST00000637404 953 ntBASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
OTOP1Q7RTM1 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 Z97205.2-201ENST00000564697 1639 ntBASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 AC084018.2-201ENST00000613093 2607 ntBASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 MIR4722-201ENST00000578292 60 ntBASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 HCG18-245ENST00000602550 559 ntTSL 4 BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 AC244452.3-201ENST00000636814 210 ntBASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
OTOP1Q7RTM1 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
OTOP1Q7RTM1 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
OTOP1Q7RTM1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.33■□□□□ 0.53
OTOP1Q7RTM1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.33■□□□□ 0.53
OTOP1Q7RTM1 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.33■□□□□ 0.53
OTOP1Q7RTM1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
OTOP1Q7RTM1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.33■□□□□ 0.53
OTOP1Q7RTM1 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
OTOP1Q7RTM1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
OTOP1Q7RTM1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
OTOP1Q7RTM1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.33■□□□□ 0.53
OTOP1Q7RTM1 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 BAATP1-201ENST00000412284 1225 ntBASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 AKR7A2P1-201ENST00000460134 915 ntBASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 FAM86LP-201ENST00000478302 853 ntBASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 KRT90P-201ENST00000549264 1064 ntBASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 AC124283.3-201ENST00000570869 594 ntBASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 U62317.3-201ENST00000608319 855 ntBASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
OTOP1Q7RTM1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 HINT2P1-201ENST00000419438 481 ntBASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
OTOP1Q7RTM1 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms