Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC084121.3-201ENST00000641716 218 ntBASIC18.93■□□□□ 0.62
CTR9Q6PD62 AC105233.6-201ENST00000642093 218 ntBASIC18.93■□□□□ 0.62
CTR9Q6PD62 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CTR9Q6PD62 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTR9Q6PD62 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.93■□□□□ 0.62
CTR9Q6PD62 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CTR9Q6PD62 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTR9Q6PD62 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTR9Q6PD62 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.93■□□□□ 0.62
CTR9Q6PD62 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC18.93■□□□□ 0.62
CTR9Q6PD62 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTR9Q6PD62 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CTR9Q6PD62 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.92■□□□□ 0.62
CTR9Q6PD62 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CTR9Q6PD62 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 AC069224.1-201ENST00000566372 1715 ntBASIC18.92■□□□□ 0.62
CTR9Q6PD62 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.92■□□□□ 0.62
CTR9Q6PD62 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.92■□□□□ 0.62
CTR9Q6PD62 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.92■□□□□ 0.62
CTR9Q6PD62 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.92■□□□□ 0.62
CTR9Q6PD62 AP005018.1-201ENST00000525475 301 ntBASIC18.92■□□□□ 0.62
CTR9Q6PD62 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.92■□□□□ 0.62
CTR9Q6PD62 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
CTR9Q6PD62 AC023310.3-201ENST00000557027 670 ntBASIC18.92■□□□□ 0.62
CTR9Q6PD62 AC100756.1-201ENST00000562736 682 ntBASIC18.92■□□□□ 0.62
CTR9Q6PD62 AC138749.3-201ENST00000567691 622 ntBASIC18.92■□□□□ 0.62
CTR9Q6PD62 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
CTR9Q6PD62 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 AL450472.2-201ENST00000603663 1156 ntBASIC18.92■□□□□ 0.62
CTR9Q6PD62 AC116165.1-201ENST00000611806 668 ntBASIC18.92■□□□□ 0.62
CTR9Q6PD62 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.92■□□□□ 0.62
CTR9Q6PD62 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTR9Q6PD62 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.91■□□□□ 0.62
CTR9Q6PD62 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.91■□□□□ 0.62
CTR9Q6PD62 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.91■□□□□ 0.62
CTR9Q6PD62 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CTR9Q6PD62 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.91■□□□□ 0.62
CTR9Q6PD62 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.91■□□□□ 0.62
CTR9Q6PD62 RPL13P2-201ENST00000440687 659 ntBASIC18.91■□□□□ 0.62
CTR9Q6PD62 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.91■□□□□ 0.62
CTR9Q6PD62 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.91■□□□□ 0.62
CTR9Q6PD62 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.91■□□□□ 0.62
CTR9Q6PD62 HNRNPUP1-201ENST00000554987 333 ntBASIC18.91■□□□□ 0.62
CTR9Q6PD62 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.91■□□□□ 0.62
CTR9Q6PD62 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.91■□□□□ 0.62
CTR9Q6PD62 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CTR9Q6PD62 AC097359.3-201ENST00000603982 1210 ntBASIC18.91■□□□□ 0.62
CTR9Q6PD62 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.91■□□□□ 0.62
CTR9Q6PD62 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 AC092850.2-201ENST00000623821 2697 ntBASIC18.91■□□□□ 0.62
CTR9Q6PD62 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CTR9Q6PD62 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.91■□□□□ 0.62
CTR9Q6PD62 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.91■□□□□ 0.62
CTR9Q6PD62 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CTR9Q6PD62 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.9■□□□□ 0.62
CTR9Q6PD62 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 AC011477.6-201ENST00000604980 1927 ntBASIC18.9■□□□□ 0.62
CTR9Q6PD62 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.9■□□□□ 0.62
CTR9Q6PD62 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CTR9Q6PD62 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
CTR9Q6PD62 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.9■□□□□ 0.62
CTR9Q6PD62 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTR9Q6PD62 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms