Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 OR2I1P-210ENST00000642037 4691 ntBASIC16.36■□□□□ 0.21
CASC4Q6P4E1 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CASC4Q6P4E1 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.35■□□□□ 0.21
CASC4Q6P4E1 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 MED15P5-201ENST00000423150 992 ntBASIC16.35■□□□□ 0.21
CASC4Q6P4E1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 AP002472.1-201ENST00000577490 586 ntBASIC16.35■□□□□ 0.21
CASC4Q6P4E1 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 AC120114.3-201ENST00000611923 658 ntBASIC16.35■□□□□ 0.21
CASC4Q6P4E1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
CASC4Q6P4E1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 AC092865.6-201ENST00000642101 219 ntBASIC16.34■□□□□ 0.21
CASC4Q6P4E1 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 AC134407.2-201ENST00000625089 1978 ntBASIC16.34■□□□□ 0.21
CASC4Q6P4E1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.34■□□□□ 0.21
CASC4Q6P4E1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.33■□□□□ 0.21
CASC4Q6P4E1 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CASC4Q6P4E1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
CASC4Q6P4E1 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.33■□□□□ 0.21
CASC4Q6P4E1 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.33■□□□□ 0.21
CASC4Q6P4E1 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms