Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 AC005252.3-201ENST00000623855 2258 ntBASIC12.13□□□□□ -0.47
MRPL54Q6P161 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 NABP1-203ENST00000409510 843 ntTSL 5 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 AC008677.1-201ENST00000519230 1561 ntBASIC12.13□□□□□ -0.47
MRPL54Q6P161 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.13□□□□□ -0.47
MRPL54Q6P161 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
MRPL54Q6P161 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 DMBT1P1-203ENST00000636837 4628 ntBASIC12.12□□□□□ -0.47
MRPL54Q6P161 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 AJ011931.1-201ENST00000618749 2492 ntBASIC12.12□□□□□ -0.47
MRPL54Q6P161 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 GXYLT1P3-201ENST00000453058 1193 ntBASIC12.12□□□□□ -0.47
MRPL54Q6P161 GUSBP12-201ENST00000513727 720 ntBASIC12.12□□□□□ -0.47
MRPL54Q6P161 NAPSB-206ENST00000562112 1266 ntBASIC12.12□□□□□ -0.47
MRPL54Q6P161 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 MIR4492-201ENST00000581627 80 ntBASIC12.12□□□□□ -0.47
MRPL54Q6P161 MPDU1-223ENST00000582151 728 ntBASIC12.12□□□□□ -0.47
MRPL54Q6P161 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 AC006504.5-208ENST00000588784 2401 ntBASIC12.12□□□□□ -0.47
MRPL54Q6P161 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.12□□□□□ -0.47
MRPL54Q6P161 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
MRPL54Q6P161 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms