Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 AC097376.2-205ENST00000610159 5334 ntBASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.41■□□□□ 0.06
PPP4R4Q6NUP7 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 IGHV3-22-201ENST00000520721 359 ntBASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 AC010654.1-201ENST00000615722 808 ntBASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 AC106881.1-201ENST00000605849 3329 ntBASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.4■□□□□ 0.06
PPP4R4Q6NUP7 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 AC108073.2-201ENST00000464002 357 ntBASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 AC106730.1-201ENST00000566722 1090 ntBASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.39■□□□□ 0.05
PPP4R4Q6NUP7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms